Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g01191 ATGAAGAGAAACAACGTTTTGGATCTGAAAACGCTAATTGAGGAGCTGGAGTGTTCAGTTGAAGTTCCTTCCGTATTCATCTGCCCAATCTCGCTAGAGCCAATGCAAGACCCCGTAACCCTTTGCACCGGACAAACCTACGACCGTTCCAACATCCTCAAATGGTTCTCCCTCGGTCACAACACGTGCCCCACCACAATGCAGGAGCTTTGGGACGATTCGGTCACCCCAAACACCACTCTTCATCATTTCATACTCTCTTGGTTCTCGCAGAAATACTTGGCCATGAAAAAGAAGCTCGAGGATGTTCAAGGCACGGCCTTGGAGCTCTTGGACACGCTCAAAAAGGTTAAGGGTAGTCAAAACAGAGTTCGAGCACTCAAACAACTCGCCCAACTCGTTGATTCCCATGTTTCCACGAGGAAGACCGTTGAGGAAAACAACGGTGCTTCTTTGATTTCTTCCTTGTTGGGTCCTTTCACCTCCCACGCGGTTGGGTCCGAAGCAATTGGGATTCTCGTGAATTTGGAGCTGGGTTCGGAGTTGAAGAGGAATCTCATGCACCCCGCAAAGGTGTCGTTGTTGGTGGACATCATGAACGAGGGAACCATTCAGACAAAGATGAATTGCGCCAAGCTCATTCAAACGTTGTTGGTGGAAGGTAACCCCTCCGAGACGGTTGTTTTATCGAGTTTGAGTCTTTTGGTTGGGGTTTTAAGGTTAGTGAGAGATAAGAAGCACCCTACTAGTGTTTTAACCGGACTCATATTACTCAAAATTGTGTGTTCGCGTGAATCGGTTAGAGGCTCAGTTATAAGCATAGGAGCGGTGCCTCAGTTGATTCAGCTTTTGCCCACATTGAACAACGAGTGTTTGGAGATAGCACTTCATATTCTTGAACTGTTGTCAACGCTTCCTGAGGGCAGATTGGCTTTGAAAGAGTGTCCAAACATTATTCCCAATGTGGTTAAATTGTTAATGAGAGTCTCCGAGAGTTGCACGCAATTTGCATTGTCGATATTGTGGGCTATTTACAAGCTTGCCCCGGAAGAATGTGCTTCCAAAGCTGTGGAGGCAGGGTTGGCACCTAAGCTACTGCTAGTGATTCAAAGTGGTTGCAACCCGGTGTTGAAGCAGAAATCTGCTGAGTTTTTGAAAATGTGCAGTTTAGATTACTCTACTAGTATTTTCATTTCTAAGTGTATGCTTACTGCCACAATACAATGA 1227 0.4605 MKRNNVLDLKTLIEELECSVEVPSVFICPISLEPMQDPVTLCTGQTYDRSNILKWFSLGHNTCPTTMQELWDDSVTPNTTLHHFILSWFSQKYLAMKKKLEDVQGTALELLDTLKKVKGSQNRVRALKQLAQLVDSHVSTRKTVEENNGASLISSLLGPFTSHAVGSEAIGILVNLELGSELKRNLMHPAKVSLLVDIMNEGTIQTKMNCAKLIQTLLVEGNPSETVVLSSLSLLVGVLRLVRDKKHPTSVLTGLILLKIVCSRESVRGSVISIGAVPQLIQLLPTLNNECLEIALHILELLSTLPEGRLALKECPNIIPNVVKLLMRVSESCTQFALSILWAIYKLAPEECASKAVEAGLAPKLLLVIQSGCNPVLKQKSAEFLKMCSLDYSTSIFISKCMLTATIQ 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g01191 408 Gene3D - 238 388 IPR011989 -
Pste2g01191 408 Gene3D - 103 237 IPR011989 -
Pste2g01191 408 SUPERFAMILY ARM repeat 111 236 IPR016024 -
Pste2g01191 408 PANTHER WDSAM1 PROTEIN 17 395 IPR045185 GO:0061630
Pste2g01191 408 SMART Ubox_2 25 88 IPR003613 GO:0004842|GO:0016567
Pste2g01191 408 Pfam U-box domain 22 92 IPR003613 GO:0004842|GO:0016567
Pste2g01191 408 SUPERFAMILY ARM repeat 218 389 IPR016024 -
Pste2g01191 408 CDD RING-Ubox_PUB 23 75 IPR045210 -
Pste2g01191 408 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 3 102 IPR013083 -
Pste2g01191 408 SUPERFAMILY RING/U-box 19 92 - -
Pste2g01191 408 ProSiteProfiles U-box domain profile. 21 95 IPR003613 GO:0004842|GO:0016567
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g01191 Pste-Chr2 12931425 12932651 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g01191 7 408 U-box Gene Family AT3G49810 63.433 1.86e-180 508
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g01191 2 12931425 12932651 Pste2g01191 2 12931425 12932651 ECH