Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g01184 GATATGCACTGTCTTGGGTGTCTATGTCTGATGCTGTAGTTGTTGGTCACCTAGAGCATGATCACAACGTATGCAATCTTACAACATATCCCAATCTATGTGCTGAAACCTTGATGGAATTTGGTTCAGGGAAGCAAAATATTGATGACAATATTGTGTCTCTTGTTAACAAAACCATATTTGAAACCAACTTGCCAAGTTCATATTTTGCAGAATTCAAGTCTGAGAATGCTCAACCATCCCACTCTGTTGTTGCAGACTATTGTGAAGAACTAATGAGCATGTCACTGATGAGGCTGGACCAATCCCTGAGAGCACTGAAATCCCCCAAAAGAAACACCAATGACATCCAAACATGGCTAAGTGCTTCTCTAACTTTCCAACAATCTTGCAAAGACCATGTACATGCACACACCTCAAAACCCTCTTCAGATGACCTTATGCAAAGGATGTCCAACAAAATGGACTATCTTTCTCGATTGGGAAGCAACTCATTGGCACTTGTTAACCAAATGAGCACAACAAAACTTGGTGCTGATTATGAAAAAGAACATGAATTTCCCAAATGGGTATCATCCGCAGGACGAAAACTGCTCCAAGGGGCCACCATAAAAGCAAATGTAATAGTAGCACAAGATGGTTCTGGAAACTATAAGACAGTTTCTGAAGCCATTGAGGCTGCTACAGGATCACGGTTTGTGATTTATGTTAAGGAAGGGGTTTATAAGGAGAAGATTCGCACCAGCAAGGATGGTATCACTTTGATTGGAGATGGAAAATACTCTACTCTTATTGTTGGAGATGATAGTGTTGCTCAGGGTGCTACTTTGCCTGGGTCTTCAACATTCAGTGAGTCTCTTTCTCTATTTTCTCTCCAATTCTCACTTCTCTCACACACAAGCTTCCACAACAACGCCGGCCCAGCCGGCGAGCAAGCGGTGGCGCTGCACATCGCCTCAGACCACGCCGTCCTCTTCAGATGCACCATAGCCGGCTACCAAGACACCCTCTACGCCCACGCCCTCCGCCAATTCTACCGCGACTGCGATATCTACGGCACCGTCGACTTCATCTTCGGCAACGCCGCCGCAGTCCTCCAACGGTCCACCCTCTTCCTCCGGCGCCCCCGGCCGGGCGCCTACAACGCAGTCCTGGCGAACGGCAGAACCGACGCCGGCCAAAACACGGGCTTCTCCGTCCACAAATGCAGCATCGTCCCCAGCTCGGATTTCTCCCCCGTGAAGCACTCCTACGCGTCGTTTCTGGGCCGGCCCTGGAAGGAGTATTCTAGGGCTGTCGTCATGGAGAGCGTCATCGACGACGCCGTTGCGGCCAGGGGCTGGATCCAGTGGCCCGGCTATGGAAGCTCCGTGTTAAAAAGTTTGTATTTTGCTGAGTACGGAAATGAAGGCCCTTCTGCTGGAACTGCCAAGAGGGTGCAGTGGCCCGGTTTTCATGTTCTTCAGGCTCAGGATGCTGCTAAGTTTACTGTTGCTGCTTTTATTGGTGGAAATTCGTGGATTCCTTCCACCGGTGTTGCTTTTATTTCCGGGCTTATT 1559 0.4881 MSDAVVVGHLEHDHNVCNLTTYPNLCAETLMEFGSGKQNIDDNIVSLVNKTIFETNLPSSYFAEFKSENAQPSHSVVADYCEELMSMSLMRLDQSLRALKSPKRNTNDIQTWLSASLTFQQSCKDHVHAHTSKPSSDDLMQRMSNKMDYLSRLGSNSLALVNQMSTTKLGADYEKEHEFPKWVSSAGRKLLQGATIKANVIVAQDGSGNYKTVSEAIEAATGSRFVIYVKEGVYKEKIRTSKDGITLIGDGKYSTLIVGDDSVAQGATLPGSSTFSESLSLFSLQFSLLSHTSFHNNAGPAGEQAVALHIASDHAVLFRCTIAGYQDTLYAHALRQFYRDCDIYGTVDFIFGNAAAVLQRSTLFLRRPRPGAYNAVLANGRTDAGQNTGFSVHKCSIVPSSDFSPVKHSYASFLGRPWKEYSRAVVMESVIDDAVAARGWIQWPGYGSSVLKSLYFAEYGNEGPSAGTAKRVQWPGFHVLQAQDAAKFTVAAFIGGNSWIPSTGVAFISGLI 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g01184 512 Pfam Pectinesterase 199 497 IPR000070 GO:0030599|GO:0042545
Pste2g01184 512 SUPERFAMILY Pectin lyase-like 194 510 IPR011050 -
Pste2g01184 512 Gene3D - 193 511 IPR012334 -
Pste2g01184 512 SMART PMEI_2 8 160 IPR006501 GO:0004857
Pste2g01184 512 FunFam Pectinesterase 11 165 - -
Pste2g01184 512 NCBIfam pectinesterase inhibitor domain 14 164 IPR006501 GO:0004857
Pste2g01184 512 Pfam Plant invertase/pectin methylesterase inhibitor 15 160 IPR006501 GO:0004857
Pste2g01184 512 ProSitePatterns Pectinesterase signature 2. 343 352 IPR033131 -
Pste2g01184 512 CDD PMEI-like_3 16 166 - -
Pste2g01184 512 PANTHER PECTINESTERASE 14 501 - -
Pste2g01184 512 Gene3D Invertase/pectin methylesterase inhibitor family protein 14 165 IPR035513 -
Pste2g01184 512 FunFam Pectinesterase 4 196 511 - -
Pste2g01184 512 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 15 164 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g01184 Pste-Chr2 12823745 12829306 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g01184 81 511 Carbohydrate Esterase AT2G45220 44.138 1.64e-118 357