Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g01183 ATGACACTGGAAGTTGCTGAATTGGGATCTTTATCGAGCCAAAGTCTGAGCCTCGAGGCTCTCGTTTCCGATCCAAATTCTCGTTCCTCCATGGAGGACGCATTTGCCAGATCTATTCCCGAGGTCCTTGATTTCTTTGAAGTGGACCCGACTAAGGGTTTATCTGATGCTGAGGTGGTACAACATGGTAGACTTTATGGACAAAACGTCTTGGTTGATGGCACTCCAGATAACAAAATCAAACTACTCGGCTTGGCATTCAAGAAATCTACCTTCTACATTTTGTTTGCCTTGCTGCTTGAAGATCAAAGAGCTCCGTTTTGGAAAATGGTTTTGAAGCAATTTGATGATTTGCTTGTAAAGATACTAATTGCAGCTGCTCTTATATCTTTTATTCTGGCGCTAATTAATGGAGAAACAGGCTTGATGGCATTTCTGGAGCCTTCTGTTATTCTGATGATATTGGCAGCGAATGCAGCGGTTGGAGTGATTACGGAAACAAACGCTGAAAAAGCTCTTGAGGAGCTGCGTGCCTATCAAGCTGATGTAGCAACTGTCTTGCGCAATGGTTGTTTTTCCATACTTCCTGCAACTGAACTTGTTCCTGGAGATATTGTGGAAGTTTCTGTGGGGTGCAAAATTCCTGCGGACATGAGGATGATTGAGATGCTAAGCAATCAAGTGCGGGTTGATCAAGCTATTCTTACAGGTGAGAGCAGCTCTGTGGAGAAAGAGCTTAAAAAGACTACAACAACAAATGCTGTATACCAAGACAAAACTAATATTCTTTTCTCGGGTACGGTTATGGTTGCTGGTAGGGCAAGAGCTGTTGTGGTGGTAGTTGGTCCTAACACTGCCATGGGCAGCATACGTGATTCAATGTTGCGAACAGAGGATGTTATAGCAGGAATTTGTGTATTGGTGTGGATTGTAAATATTGGTCACTTTCGCGATCCTTCTCATGGTGGTTTCTTGCGTGGTGCAATTCATTATTTTAAGATTGCAGTTGCTCTGGCAGTTGCAGCAATTCCAGAAGGGCTCCCTGCAGTTGTCACGACGTGTTTGGCTCTTGGAACAAAGCGTATGGCTAGGTTGAATGCCATTGTTCGCTCCTTGCCATCAGTTGAGACCTTGGGCTGTACCACTGTTATTTGCAGTGACAAAACTGGTACTCTAACTACTAATATGATGTCAGTTGCGAAGGTTCAGAATGATAGCGTTGATTTGCAAATTGCTTTCAATGTATGTGTTGTTGAATCTGCAAAACAAGGTCCTGTTGTTTCTGAATACAGTGTCAGTGGAACAACATATGCACCAGAAGGCATAATATTTGATAGTACAGGGTTGCAGCTTGACTTTCCTGCTCAATTGCCATGTCTTCTTCACATGGCAATGTGCTCTTCTCTCTGCAATGAATCAACCCTGCAGTATAATCCTGATAAAGGGAATTATGAAAAAATTGGTGAGTCAACTGAAGTGGCACTACGCGTCTTGGCAGAAAAGGTTGGTCTCCCTGGTTTCAATTCTATGCCATCAGCCTTGAATATGTTGACTAAGCATGAACGTGCTTCTTACTGTAACCATTATTGGGAGGAACAATTTAGAAAGATACATGTTTTGGAATTTTCTCGAGATCGGAAAATGATGAGTGTCCTTTGCAGCCGGAACCAGATGCATGTTTTGTTCTCAAAGGGTGCCCCAGAAAGCATAATTTCTAGGTGTACAACCATTATGTGCAATGATGACGGTTCCATTGTGCCACTTACTACTGATATTCGAGCAGAGCTGGACTCAAGGTTCCGCAGTTTTGCAGGAAAGGAAACGTTAAGATGCCTTGCTTTAGCCTTGAAATGGATGCCCCCAATTGAACAGTCATTGTCCTTTAATGATGAGAAAGATCTTACATTTATTGGGTTGGTTGGGATGCTGGATCCTCCAAGAGATGAAGTAAGAAATGCAATGCTTTCGTGTATGACTGCTGGCATTCGTGTTATAGTTGTCACTGGAGATAACAAGTCCACTGCTGAGTCACTTTGCCGCAAGATAGGTGCTTTTGATCAAATGATACATTTTTCTGAACATTCTTACACTGCCTCTGAGTTTGAAGAACTTCCAGCACTGCAACAAACTATAGCATTACAACGTATGGCACTTTTTACCAGGGTTGAGCCTTCTCATAAAAGGATGCTGGTTGAAGCATTACAGCACCAGAATGAAGTGGTTGCAATGACGGGTGATGGAGTTAATGATGCACCTGCACTGAAGAAGGCAGATATAGGAATTGCCATGGGTTCAGGAACAGCTGTAGCTAAGAGTGCTTCAGACATGGTCCTGGCTGATGACAATTTTGCCTCAATTGTTGCAGCTGTGGCAGAGGGAAGAGCTATATATAATAATACAAAACAGTTTATTCGATACATGATTTCTTCCAATATTGGTGAAGTAGTCTGTATATTTGTGGCTGCAATGCTTGGAATACCAGATACTCTGGCCCCTGTCCAGCTGCTTTGGGTTAATTTGGTTACTGATGGACTGCCTGCCACTGCCATTGGCTTCAATAAACAAGATTCTGATGTGATGAGAGTTAAGCCTCGAAAGGTGAATGAAGCAGTTGTCTCTGGTTGGCTCTTCTTTCGCTATTTGGTAATAGGAGCTTATGTTGGCCTTGCCACAGTTGCTGGTTTTATTTGGTGGTTTGTTTATTCTGATAGTGGCCCTAAACTTCCATACACAGAATTGATGAATTTTGATACTTGTCCAACGAGGGAGACAACTTATCCATGCAGTATATTTGATGATCGACATCCATCTACTGTAGCAATGACTGTCCTTGTCGTAGTTGAGATGTTCAATGCTTTGAACAATCTTAGTGAAAATCAATCTCTTCTGGTCATCCCTCCCTGGAGTAACTTGTGGCTTGTTGGTTCCATAATCCTAACTATGCTTCTTCACATACTAATTTTATATGTTCGCCCACTGTCAGTTCTTTTCTCTGTAACACCATTGTCTTGGGCTGACTGGATAGTTGTACTCTATCTTTCATTACCTGTTATAGTCATTGATGAAATGTTAAAGTTCTTCTCCAGAAATCCCATAGGTTTGAGATTCAGATTATGGTATAGGAGGTCTGATTTACTTCCCAAAAAAGAATTACATGACAAGTAAGATATGGAGGACTATTTTAGCAAATTCTGCACTTGTGAAATCCTTGATTGAATCAAAATCATCAACCTCCATATGCATGGCTATTAAGGAGTTAAACAAGGTAGCCTCATAGGTATGTATGATATGTGTTATCTGTAATATTTATATTGTCCTTAAAATTTCTGTAATGTAAAACAACAAATGTAGGAGCCTATAGGGCTGTTATTTTATTCAATCATTCATTTTTCTTCAGTCTGTACTTTATCAATTCTTCTAGCACAAGTACCTAAAAGGTATGCATTTTGCGCTATTCTGAGAAAATTTTAATTTGTCATGTCATTTGTGTAACTTTAAACGAGAGATGTAGAGCTTTATGACATGTTGCGGAGAAGCAAAAGAAAAAAAAAGGAAAAAGGAAAAATACGAGTTTTGGTGA 3580 0.4087 MTLEVAELGSLSSQSLSLEALVSDPNSRSSMEDAFARSIPEVLDFFEVDPTKGLSDAEVVQHGRLYGQNVLVDGTPDNKIKLLGLAFKKSTFYILFALLLEDQRAPFWKMVLKQFDDLLVKILIAAALISFILALINGETGLMAFLEPSVILMILAANAAVGVITETNAEKALEELRAYQADVATVLRNGCFSILPATELVPGDIVEVSVGCKIPADMRMIEMLSNQVRVDQAILTGESSSVEKELKKTTTTNAVYQDKTNILFSGTVMVAGRARAVVVVVGPNTAMGSIRDSMLRTEDVIAGICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAVAAIPEGLPAVVTTCLALGTKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKVQNDSVDLQIAFNVCVVESAKQGPVVSEYSVSGTTYAPEGIIFDSTGLQLDFPAQLPCLLHMAMCSSLCNESTLQYNPDKGNYEKIGESTEVALRVLAEKVGLPGFNSMPSALNMLTKHERASYCNHYWEEQFRKIHVLEFSRDRKMMSVLCSRNQMHVLFSKGAPESIISRCTTIMCNDDGSIVPLTTDIRAELDSRFRSFAGKETLRCLALALKWMPPIEQSLSFNDEKDLTFIGLVGMLDPPRDEVRNAMLSCMTAGIRVIVVTGDNKSTAESLCRKIGAFDQMIHFSEHSYTASEFEELPALQQTIALQRMALFTRVEPSHKRMLVEALQHQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFASIVAAVAEGRAIYNNTKQFIRYMISSNIGEVVCIFVAAMLGIPDTLAPVQLLWVNLVTDGLPATAIGFNKQDSDVMRVKPRKVNEAVVSGWLFFRYLVIGAYVGLATVAGFIWWFVYSDSGPKLPYTELMNFDTCPTRETTYPCSIFDDRHPSTVAMTVLVVVEMFNALNNLSENQSLLVIPPWSNLWLVGSIILTMLLHILILYVRPLSVLFSVTPLSWADWIVVLYLSLPVIVIDEMLKFFSRNPIGLRFRLWYRRSDLLPKKELHDK 1054
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g01183 1054 FunFam Calcium-transporting ATPase 395 645 - -
Pste2g01183 1054 Gene3D - 101 295 - -
Pste2g01183 1054 PANTHER CALCIUM-TRANSPORTING ATPASE 41 1030 - -
Pste2g01183 1054 Pfam Cation transporting ATPase, C-terminus 828 1027 IPR006068 -
Pste2g01183 1054 FunFam Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 290 424 - -
Pste2g01183 1054 SUPERFAMILY HAD-like 631 792 IPR036412 -
Pste2g01183 1054 SFLD C1.7: P-type atpase like 366 796 - -
Pste2g01183 1054 NCBIfam calcium-translocating P-type ATPase, SERCA-type 111 899 IPR005782 GO:0005388|GO:0006816|GO:0016020
Pste2g01183 1054 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 392 642 IPR023299 GO:0000166
Pste2g01183 1054 Gene3D - 382 788 IPR023214 -
Pste2g01183 1054 Pfam Cation transporter/ATPase, N-terminus 101 130 IPR004014 -
Pste2g01183 1054 Pfam Cation transporter/ATPase, N-terminus 38 97 IPR004014 -
Pste2g01183 1054 SFLD p-type atpase 366 796 IPR044492 -
Pste2g01183 1054 Gene3D - 113 1029 - -
Pste2g01183 1054 Pfam haloacid dehalogenase-like hydrolase 636 758 - -
Pste2g01183 1054 FunFam Calcium-transporting ATPase 170 295 - -
Pste2g01183 1054 FunFam Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 740 1033 - -
Pste2g01183 1054 FunFam Sodium/potassium-transporting ATPase subunit alpha 637 783 - -
Pste2g01183 1054 NCBIfam HAD-IC family P-type ATPase 150 406 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pste2g01183 1054 NCBIfam HAD-IC family P-type ATPase 714 829 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pste2g01183 1054 ProSitePatterns E1-E2 ATPases phosphorylation site. 387 393 IPR018303 -
Pste2g01183 1054 SMART Cation_ATPase_N_a_2 33 135 IPR004014 -
Pste2g01183 1054 PRINTS P-type cation-transporting ATPase superfamily signature 767 779 - -
Pste2g01183 1054 PRINTS P-type cation-transporting ATPase superfamily signature 744 763 - -
Pste2g01183 1054 PRINTS P-type cation-transporting ATPase superfamily signature 385 399 - -
Pste2g01183 1054 PRINTS P-type cation-transporting ATPase superfamily signature 231 245 - -
Pste2g01183 1054 PRINTS P-type cation-transporting ATPase superfamily signature 660 670 - -
Pste2g01183 1054 PRINTS P-type cation-transporting ATPase superfamily signature 638 649 - -
Pste2g01183 1054 SUPERFAMILY Calcium ATPase, transmembrane domain M 32 1029 IPR023298 -
Pste2g01183 1054 SUPERFAMILY Calcium ATPase, transduction domain A 182 293 IPR008250 -
Pste2g01183 1054 Pfam Cation transport ATPase (P-type) 469 577 - -
Pste2g01183 1054 Gene3D - 395 645 IPR023299 GO:0000166
Pste2g01183 1054 Pfam E1-E2 ATPase 301 364 - -
Pste2g01183 1054 Pfam E1-E2 ATPase 180 297 - -
Pste2g01183 1054 Coils Coil 169 189 - -
Pste2g01183 1054 PRINTS H+-transporting ATPase (proton pump) signature 744 760 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pste2g01183 1054 PRINTS H+-transporting ATPase (proton pump) signature 716 732 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pste2g01183 1054 PRINTS H+-transporting ATPase (proton pump) signature 775 800 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g01183 Pste-Chr2 12819786 12848261 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g01183 31 1048 Primary Pumps ATPases(2) AT1G10130 79.151 0.0 1660
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g01183 2 12819786 12848261 Pste2g01183 2 12819786 12848261 ECH