Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g01182 GTGTGTTGTCGTATATGTGCCACTCCACAAAGCTTGGAAGATGCAGAGTCCAGACTCTGTCTTAGACACAATTCATCCCAGTCAAACCCAATGGCGTTCCAAGATTTCGACCTCATCTCAGAACGGCGAAGAAACGAGGCCAAACTGAAGATGAGGAAGAAGATCCTCATCGGCGTCGTATCCACCATTCTCCTGGCATGCGTGGTCGGCGCCGCCACTTTCGTGGTGGTTCAAAGAACAGGGCCCACCACAAAGCAAGCGACTCCAATGGAACCGATGGTGGCTTCCCCACACGTGGACAGAAACTCAAGGCTGGTTGAGATGATTTGCAGCTCCGCGGAGTACAAAGACAAGTGCAAAACCTCCATCGGTGAAGCCCTAAAGAAAGATCCAAAACTGGCGGAGCCCAAAGACGTGGTCTTGGTGTCCATGGTTCTGGCGGAGAATGAGGTCGACAAGGCCTTCAATGAAACCGCGAAAATGGACTTTGCCACCGAAGAGGAGAAGGGTGCGTACGAGGATTGTAAAGCGTTGTTGGAAGATGCTAAGGAGGAGCTAGGGAAGTCGATCAACGAGGTCGATGGAAACGACGCCAATACCCTTACAGCGAAGGTTTCCCAACTCAACAGCTGGCTCAGTGCAGTTATGTCGTACCAGCAAACCTGCATTGACGGTTTCCCCAATGGGAAGATGAAGAACGATTTCAGCAACATGTTTAACGAGTCAAGGGAGCTTGTGAGCAATTCTCTCGCGGTTGTGTCGCAGTTTTCTTCCTTCTTTTCCATCTTCCAAGGCGCTGGGAACCTTCACCTTCCATGGGACCTCGACAACAACAACGGTGTTGGTGTTGCTGTTGCTGCTCGTGCTCCTGCACCTTCTGTTCCTGCTTCTTCGTCTGGTTCGAATCCTTCTTCTATTGCTTCTCCTCCAGGGGTTGCTCTAGCTCCTCAAGGTTCTCATAATGGTTATGCTGCTGCTGCTCCTGGTGCAACTCCTCGTCCCGCTCCTGGCCCGCTTCCTTCTTGGGCTTCTGGTGAAATTCCCCAATGGGCTACCCCAGTTCCTTCTTGGACCGGCCCATCTGACTTTATTGGATCATATGACAGACCCACACCTAATGAAGGAGTGTACGATGAGACCGTGACAGTGACGAGGAAGATGGTTAACTTAACCATGTATGGTGATGGAGGGAGAAAGAGTATCATCACTGGCAACAAAAATTACGTCGATGGAGTCAGAACTTTCCAAACTGCATCATTTGTGGTACTTGGAGATGGATTCTTGGGCAAAGACATGGGATTCAGAAACACAGCAGGAGCAGAGAAGCATCAAGCAGTGGCAGCGAGAATCCAAGCGGACCAAGCAATATTCTTCAACTGCAACTTCGAGGGGTTCCAAGACACTCTGTACGCCCAAACCCACAGACAGTTCTACCGCGACTGCTACATCTCCGGCACGATCGACTTCATCTTCGGAGACTCCTCAGCAGTGTTCCAGAACTGCACCATGGTGGTGAGAAGACCCCTGGACAACCAGCAGAACATCGTGACAGCACACGGCAGGCTCGACAAGTCCGAAAACACAGGCTTCGTTCTGCAGAACTGTGTCATCAAAGCCGATGATGACTTGGTCGCTGTCAAAGACACCATCAGGAGCTACCTCGGAAGACCATGGAAGGAGTACTCTCGGACCATCGTCATGGAGTCTCAGATTGATGATCTCATTCACCCTGATGGCTGGCTCCCTTGGGAAGGGACCTTCGGTCTCAGCACTCTCTATTATGGTGAGTACTCCAACACTGGTGTCGGTGCCAACACCAATGCTAGGGTTCCTTGGCCTACACGCAAAAACATTGTTCGGGATGAGGCTACCAGATACACTGTTGAGGCTTTCTTGCAAGGGACATGGATCAATGGCACCACTGTGCCTGCTCATCTGGGCTTGTACAATTAATACTATCCTTCATTTCCTAATCTCATCAAATGTATAATCTCCCAGTTTGAGTCCAATGCATTTTATCTTTCCC 2026 0.5049 VCCRICATPQSLEDAESRLCLRHNSSQSNPMAFQDFDLISERRRNEAKLKMRKKILIGVVSTILLACVVGAATFVVVQRTGPTTKQATPMEPMVASPHVDRNSRLVEMICSSAEYKDKCKTSIGEALKKDPKLAEPKDVVLVSMVLAENEVDKAFNETAKMDFATEEEKGAYEDCKALLEDAKEELGKSINEVDGNDANTLTAKVSQLNSWLSAVMSYQQTCIDGFPNGKMKNDFSNMFNESRELVSNSLAVVSQFSSFFSIFQGAGNLHLPWDLDNNNGVGVAVAARAPAPSVPASSSGSNPSSIASPPGVALAPQGSHNGYAAAAPGATPRPAPGPLPSWASGEIPQWATPVPSWTGPSDFIGSYDRPTPNEGVYDETVTVTRKMVNLTMYGDGGRKSIITGNKNYVDGVRTFQTASFVVLGDGFLGKDMGFRNTAGAEKHQAVAARIQADQAIFFNCNFEGFQDTLYAQTHRQFYRDCYISGTIDFIFGDSSAVFQNCTMVVRRPLDNQQNIVTAHGRLDKSENTGFVLQNCVIKADDDLVAVKDTIRSYLGRPWKEYSRTIVMESQIDDLIHPDGWLPWEGTFGLSTLYYGEYSNTGVGANTNARVPWPTRKNIVRDEATRYTVEAFLQGTWINGTTVPAHLGLYN 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g01182 650 Coils Coil 165 192 - -
Pste2g01182 650 NCBIfam pectinesterase inhibitor domain 99 255 IPR006501 GO:0004857
Pste2g01182 650 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 104 257 IPR035513 -
Pste2g01182 650 MobiDBLite consensus disorder prediction 294 308 - -
Pste2g01182 650 FunFam Pectinesterase 372 648 - -
Pste2g01182 650 CDD PMEI-like_3 109 253 - -
Pste2g01182 650 MobiDBLite consensus disorder prediction 291 355 - -
Pste2g01182 650 FunFam Pectinesterase 102 257 - -
Pste2g01182 650 Pfam Pectinesterase 374 634 IPR000070 GO:0030599|GO:0042545
Pste2g01182 650 Gene3D - 373 648 IPR012334 -
Pste2g01182 650 PANTHER PECTINESTERASE 68 638 - -
Pste2g01182 650 SUPERFAMILY Pectin lyase-like 374 640 IPR011050 -
Pste2g01182 650 Gene3D Invertase/pectin methylesterase inhibitor family protein 102 256 IPR035513 -
Pste2g01182 650 SMART PMEI_2 101 252 IPR006501 GO:0004857
Pste2g01182 650 ProSitePatterns Pectinesterase signature 2. 483 492 IPR033131 -
Pste2g01182 650 Pfam Plant invertase/pectin methylesterase inhibitor 105 251 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g01182 Pste-Chr2 12811375 12814760 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g01182 31 650 Carbohydrate Esterase AT2G26450 38.788 9.03e-159 468