Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g01180 ATGAAAGGAGAAGAAGCAACTCTCTCTTTTATACACGTGAAGCCGCATGAGGCAAAATGGGAGCAAAAACGCGCAAAGCCCAAGCGGTCAGGGAGTAGATTATTTTTCATGGCTTATTCATTTCAAAAACTCTTCTTTCTCATTGCTTTTTTTTTACATACTTGTATCCGCTCTACCAATGCTTCCATAACAATCAATGTCGATCTCCCTTTCTTAACATCATTATGCAAATCGACCCCATACCCAATACTTTGTTTCACTTCATTGAATGTAACCATCCAAGACAACAACTCAAGTCCAAACATAAACAACTACCTCCTTCAGTCCCTCCAAGTATCAATATCTGAAACTACAAAGCTGTTGAATCTCTTCAACAATGTTGGTCCCTCAAACATCACAGAGAAGCAAAGAGGAGCAGTTCAAGACTGTAGGGAACTTCATCAATCCACATTGGCTTTTTTAAATAGAACACTGTCAGGGTTAAGTTCCTCCAGCATCAACATAATTGATGCAAATATCTACCTCAGTGCGGCCCTCACCAACAAGAACACATGTCTAGAGGGTCTAGATTCTGCTTCTGGCACCATGAAGCCAACTCTGGTGAAATCTGTGATCAACACTTACAAGCATGTTAGTAACTCTCTTTCAATTCTCTCCAACCCACAGATGGAGACTCCTCAATACCTGTCTCTGATGGATGATCCAAAGTGGCCATCAAGCAGTGATCAAGGGCTCTTTGGAGACTCTGATGGTGAAGAATATGACCCAAATGAAGTGATTTTTGTAGCTACAGATGGAAGTGGAAATTTTAGGACCATCACTGAAGCCATCAACTTTGCTCCAAATAACAGCGAGGACAGGACAGTGATCCGTGTCAAACAAGGGACTTACATAGAAAATGTGGAAATTCCAAGCTACAAGACCAACATTGTGATGATTGGCGACGGAAGTGATGCCACTTTCATAACTGGTAATAGAAGTCATGTTGGTAACTGGACAACTTACCATTCTGCAACTGTAGGGGTCTCTGGCGAAGGATTTCTGGCACGTGATATAGCGTTTGTGAACAGTGCTGGGCCAGAAAAGCTACAAGCAGTTGCTTTGAGGGTAAATGCAGAATTCACTGCGTTTTACAGGTGTCTGATTGATGGTTACCAAGACACTTTATACGTTCACTCCTGTAGACAATTCTATAGAGAGTGTGACATTTATGGGACCATAGATTTCATATTTGGGAATGCAGCAGTGGTCCTACAAGAATGTAACATTGTATCCAGAAAACCGTTGCCTGGTCAATACAACGTTATCACTGCACAGGGTAGAGATGACTCAAATGAGGCAACAGGGATCTCAATCCAAAGCTGCTATATAAGAGCTGACTTTGATGACTCTAGTGTCAAGAGCTACCTTGGGAGGCCATGGAAGGCCTATTCTCGCACCGTTTACCTTGAGTCCTACGTTGATGACTTCATTGACCCAAAGGGTTGGATACTGATGCCTAACTCTGCTGAGCAACAATCGAAAACTTTGTATTATGGAGAGTATAATAATAAAGGACCTGGTGCTAGCACAGATAATCGTGTGAATTGGTCTGGGTACCACGTGATGGATGATGTTGATGCCTTCAATTTCACAGTTTTGAAGTTCATTTTTAGTGGAAGTGATTGGCTTGAAAAAACTTGGTTTCCTTATGACAGAATTTGA 1704 0.4178 MKGEEATLSFIHVKPHEAKWEQKRAKPKRSGSRLFFMAYSFQKLFFLIAFFLHTCIRSTNASITINVDLPFLTSLCKSTPYPILCFTSLNVTIQDNNSSPNINNYLLQSLQVSISETTKLLNLFNNVGPSNITEKQRGAVQDCRELHQSTLAFLNRTLSGLSSSSINIIDANIYLSAALTNKNTCLEGLDSASGTMKPTLVKSVINTYKHVSNSLSILSNPQMETPQYLSLMDDPKWPSSSDQGLFGDSDGEEYDPNEVIFVATDGSGNFRTITEAINFAPNNSEDRTVIRVKQGTYIENVEIPSYKTNIVMIGDGSDATFITGNRSHVGNWTTYHSATVGVSGEGFLARDIAFVNSAGPEKLQAVALRVNAEFTAFYRCLIDGYQDTLYVHSCRQFYRECDIYGTIDFIFGNAAVVLQECNIVSRKPLPGQYNVITAQGRDDSNEATGISIQSCYIRADFDDSSVKSYLGRPWKAYSRTVYLESYVDDFIDPKGWILMPNSAEQQSKTLYYGEYNNKGPGASTDNRVNWSGYHVMDDVDAFNFTVLKFIFSGSDWLEKTWFPYDRI 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g01180 567 ProSitePatterns Pectinesterase signature 2. 403 412 IPR033131 -
Pste2g01180 567 Pfam Pectinesterase 260 550 IPR000070 GO:0030599|GO:0042545
Pste2g01180 567 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 71 219 IPR035513 -
Pste2g01180 567 PANTHER PECTINESTERASE 56 558 - -
Pste2g01180 567 FunFam Pectinesterase 253 567 - -
Pste2g01180 567 NCBIfam pectinesterase inhibitor domain 44 219 IPR006501 GO:0004857
Pste2g01180 567 CDD PMEI-like_3 74 221 - -
Pste2g01180 567 Gene3D Invertase/pectin methylesterase inhibitor family protein 67 220 IPR035513 -
Pste2g01180 567 Pfam Plant invertase/pectin methylesterase inhibitor 71 217 IPR006501 GO:0004857
Pste2g01180 567 SUPERFAMILY Pectin lyase-like 257 564 IPR011050 -
Pste2g01180 567 SMART PMEI_2 67 217 IPR006501 GO:0004857
Pste2g01180 567 Gene3D - 255 566 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g01180 Pste-Chr2 12800721 12805501 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g01180 73 565 Carbohydrate Esterase AT2G26440 58.869 0.0 575