Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g01174 ATGGCTTATTCATCTCAGAAGCTCTTATTTCTTCTGTTTGCATTCTTCTTCTCACACACTTGTGCTGTCAACTCTTCCAATGCTTCCACAACACTTAATACGAATTTCTCTTCATTAAAATCTTTCTGCTCAAGTACACCATACCCAGAAGTTTGTTTCGATTCATTGAAGCTATCCATCTCAATAAACATAAATCCAAACATAATCAACTACCTCCTTCAGTCCCTTCAAGTTGCAATATCTGAAACCACAAAGCTGTCAAATCTCTTCCACAATGTTGGACACTCAAACATCATAGAGAAGCAAAGAGGAGCAGTTCAAGACTGCAGAGAACTCCACCAATCCACATTGACTTCATTGAAAAGATCACTATCAGGGGTTCGTTCCTCCGACTCCAGGAACATAGTTGAGGCAAGAGCCTACCTCAGTGCAGCACTAACCAACAAGAACACATGTCTTGAAGGCCTAGATTCTGCTTCTGGTACCATGAAGCCAGCTCTGGTGAAATCTGTGATCAACACTTACAAGCATGTCAGTAACTCCCTCTCAATGCTCCCTAAGCCAGAGATTGGGACGACCAAAGACCAAAAGAATCAGGGTTTGAGAGGTGATTCAAAGTGGTTATCAAGACGTGAAAATGGCATCTTTCAAGACTCAGATGGCGAAGATTATGACCCAAATGAAATGCTAGTAGTGGCTGCTGATGGAACTGGGAACTTTAGCACCATCACTGAAGCCATTAACTTTGCTCCAAATAACAGCATGGATAGGACAATGATCTATGTCAAAGAAGGGGTTTATGAGGAAAATGTGGAAATCCCTAGCTATAAGACCAACATTGTTATGTTTGGTGATGGAAGTGATGTCACTGTGATAACTGGCAACAGAAGCGTCGGTGATGGCTGGACCACTTTCAGATCTGCTACTCTAGCGGTCTCTGGTGATGGTTTTGTGGCACGTGATATTGCAATTGAGAACAGTGCAGGACCAGAGAAGCATCAAGCAGTGGCCTTGAGGGTAAATGCAGACTTAACTGCTTTTTACAGGTGTGCAATTTATGGTTACCAAGACACTTTATATGTTCACTCCTTTAGACAATTCTATAGAGAGTGTGACATTTATGGGACCATAGATTTCATATTTGGAAATGCAGCAGTGATTCTACAAGAAAGTAACATCATATCCAGAAAGCCAATGCTTGGCCAATTCACTGTTATCACAGCACAATCCAGAGATAGCCCTGATGAAGACACTGGCATCTCATTCCAAAACTGTTCAATCATAGCAACCCTTGATCTGTATTCCAACTCCAGTAGCTTCAAGAGTTACCTAGGGAGGCCATGGAGGGTTTATTCTCGCACAGTTTACCTTGAGTCATACATTGATAACTTCATTGATCCAAAGGGTTGGACAAAGTGGTCTAATGAGCAAGGATTGGATACTTTGTATTATGGAGAGTATGACAATTATGGACCTGGGTCCAGCACAGACAAACGTGTTCAATGGTTTGGCTACCATTTGATGGATTATGGTGATGCCTACAATTTCACTGTTTCGGAGTTCATCAATGGAAATGGTTGGCTTGATACTACTTCCATACCTTATGATGATGGGATTTGA 1620 0.4173 MAYSSQKLLFLLFAFFFSHTCAVNSSNASTTLNTNFSSLKSFCSSTPYPEVCFDSLKLSISININPNIINYLLQSLQVAISETTKLSNLFHNVGHSNIIEKQRGAVQDCRELHQSTLTSLKRSLSGVRSSDSRNIVEARAYLSAALTNKNTCLEGLDSASGTMKPALVKSVINTYKHVSNSLSMLPKPEIGTTKDQKNQGLRGDSKWLSRRENGIFQDSDGEDYDPNEMLVVAADGTGNFSTITEAINFAPNNSMDRTMIYVKEGVYEENVEIPSYKTNIVMFGDGSDVTVITGNRSVGDGWTTFRSATLAVSGDGFVARDIAIENSAGPEKHQAVALRVNADLTAFYRCAIYGYQDTLYVHSFRQFYRECDIYGTIDFIFGNAAVILQESNIISRKPMLGQFTVITAQSRDSPDEDTGISFQNCSIIATLDLYSNSSSFKSYLGRPWRVYSRTVYLESYIDNFIDPKGWTKWSNEQGLDTLYYGEYDNYGPGSSTDKRVQWFGYHLMDYGDAYNFTVSEFINGNGWLDTTSIPYDDGI 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g01174 539 NCBIfam pectinesterase inhibitor domain 10 185 IPR006501 GO:0004857
Pste2g01174 539 SUPERFAMILY Pectin lyase-like 227 536 IPR011050 -
Pste2g01174 539 Pfam Plant invertase/pectin methylesterase inhibitor 38 184 IPR006501 GO:0004857
Pste2g01174 539 Gene3D - 225 539 IPR012334 -
Pste2g01174 539 Gene3D Invertase/pectin methylesterase inhibitor family protein 35 187 IPR035513 -
Pste2g01174 539 CDD PMEI-like_3 41 184 - -
Pste2g01174 539 FunFam Pectinesterase 35 187 - -
Pste2g01174 539 FunFam Pectinesterase 224 539 - -
Pste2g01174 539 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 39 185 IPR035513 -
Pste2g01174 539 PANTHER PECTINESTERASE 16 529 - -
Pste2g01174 539 Pfam Pectinesterase 230 525 IPR000070 GO:0030599|GO:0042545
Pste2g01174 539 ProSitePatterns Pectinesterase signature 2. 373 382 IPR033131 -
Pste2g01174 539 SMART PMEI_2 34 184 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g01174 Pste-Chr2 12762818 12764731 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g01174 20 539 Carbohydrate Esterase AT2G26440 65.602 0.0 703