Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g01172 AGAATGCAAAATCAGTGGCACAGTGGATTTCATATTTGGCCATGCCAATGCAATGTTCCAAAACTGCACAATATTGGTAAAAAAGGCTTATCAAACCAGAAGAATACAATCACAGCTCAAAGGGAAATCTATCCAACCCAATCATAATATTTTTCATGCAATCCTACATATCGATGTGTTAAATCCAAAAAGGTGGCTAGAGTGGAATGACACATTGTATTTGGACACTTTGTACTATGCTGAGTACAATAATTATGAACTTGGTGCTAAGCTTGATAGCAGAGTGAAATGGCCAGGGTACCATAGAATGAAAAATAAGTGGCATAGTGAATTTCATATTTGGTCATGCCAAAGTAGTGTTCTAAAACTGCACAATATTGGTCAAGAAAGGCTTATCAAACCAGAAGAACACAATAACGACTCAAGGGGAAATCTTCCAACCCAATCATCTGGTTTCTCCCTCCAATTCTACAACATTTCAGCAGATTATGACCTTCCAACCTTTAATAATTTTCATGCAGTCCTACATAGTGATGTGTTAAATCCAAAAGGGTGGCTAGAGTGGAATGGAACATTGTATTTGGACACTTTGTGCTATGTTGAGTACAATAATTATGGACCTGGTGCTAAGCTAGATGGCAGAGTGAAATGG 652 0.3773 MFQNCTILVKKAYQTRRIQSQLKGKSIQPNHNIFHAILHIDVLNPKRWLEWNDTLYLDTLYYAEYNNYELGAKLDSRVKWPGYHRMKNKWHSEFHIWSCQSSVLKLHNIGQERLIKPEEHNNDSRGNLPTQSSGFSLQFYNISADYDLPTFNNFHAVLHSDVLNPKGWLEWNGTLYLDTLCYVEYNNYGPGAKLDGRVKW 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g01172 200 SUPERFAMILY Pectin lyase-like 2 91 IPR011050 -
Pste2g01172 200 Gene3D - 1 101 IPR012334 -
Pste2g01172 200 Gene3D - 119 200 IPR012334 -
Pste2g01172 200 Pfam Pectinesterase 160 200 IPR000070 GO:0030599|GO:0042545
Pste2g01172 200 Pfam Pectinesterase 3 90 IPR000070 GO:0030599|GO:0042545
Pste2g01172 200 PANTHER PECTINESTERASE 128 200 - -
Pste2g01172 200 SUPERFAMILY Pectin lyase-like 126 200 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g01172 Pste-Chr2 12739631 12742564 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g01172 1 88 Carbohydrate Esterase AT4G33220 36.290 5.09e-14 67.8