Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g01170 AGCAATATTAGAAACCACAAAACTGTCAAACGTCTTCCACAATGTTGGACACTCAAACACCATAAGCAAAGAGGAGCAGTTCAAGACTATAGAGAACTCCACCAATCCACGTTGACTTCATTGAAAAGATCACTATTAGGGGTTCGTTCCTCCAACTCCAGGAACATAGTTGATGCAATAGCCTACCTCAGTGCAGCACTAACCAACAAGAACACATGTTTAGAAGGCCTAGATTCTGCTTCTGGTACCATGAAGCCAGCTCTGGTGCAATCTATGATCAACACTTACAAGCATGTCAGTAACTCCCTTTCAATGCTCGAAAGCCAGACATTGGGGCGGCCAAAGACCAAAAAAATAAGGGGTGATTCAAAGTGGTTATCAAGAAGTGAACATGGCCTCATTCAAGACTCAAATGAGGAAGATTATGACCCAAATGAAATGCTAGTAGTGGTTGTTGATAGAACTAGGAACTTTATCACCGTCACTGAAGCCATTAACTTTACTCCAAATAACAGCATGGATAGGACAATGATCTACATCAAAGGAGTTTATGAGGAAAATGTGGAAATCCCAAGCAATAAGCCAACATTTTCATGTTTGGCGATGGAAGTGATGTCACTG 621 0.4138 SNIRNHKTVKRLPQCWTLKHHKQRGAVQDYRELHQSTLTSLKRSLLGVRSSNSRNIVDAIAYLSAALTNKNTCLEGLDSASGTMKPALVQSMINTYKHVSNSLSMLESQTLGRPKTKKIRGDSKWLSRSEHGLIQDSNEEDYDPNEMLVVVVDRTRNFITVTEAINFTPNNSMDRTMIYIKGVYEENVEIPSNKPTFSCLAMEVMSL 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g01170 207 Pfam Plant invertase/pectin methylesterase inhibitor 22 105 IPR006501 GO:0004857
Pste2g01170 207 CDD PMEI-like_3 19 107 - -
Pste2g01170 207 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 21 107 IPR035513 -
Pste2g01170 207 PANTHER PECTINESTERASE 20 194 - -
Pste2g01170 207 Gene3D - 143 201 IPR012334 -
Pste2g01170 207 SUPERFAMILY Pectin lyase-like 147 196 IPR011050 -
Pste2g01170 207 Pfam Pectinesterase 149 195 IPR000070 GO:0030599|GO:0042545
Pste2g01170 207 Gene3D Invertase/pectin methylesterase inhibitor family protein 4 108 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g01170 Pste-Chr2 12728411 12737829 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g01170 23 191 Carbohydrate Esterase AT2G26440 50.000 6.87e-50 168