Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g01163 TCAATTTCTACCATCACATTCATCATCATCTTCTTGTTTTTGTTTGCTAGCTCTGAATTTGCAGGACTCCGTAGCTTGAATGTTTCTCCTTCTAAATTCATAAGGGTAGTGAGAAAAGTAGGTGATGATTTGCAAAAGGTTACCTCCATGTTTAAGTCTGAGTTAAGTAATGCCAAGCATGACCCTCTTCTTTTTAATCTCATTTCCACATGTCTCGATTTGTTAGACTTGTCAGTAGATCAGCTTAATTGGTCCATCTCTGCTGTTCAGAGTCCCAAAGGGAACCATAACAGTACCGGGGATATGAAGTCTGATTTGAGGACATGTCTTAGTGCTGTCCTTGCGAATGTAGAAACATGCACAGATAGTTTTGAAGATACAAAAAGGAATGTAAAGGGTTCAATAGCCACTAAAATTGATGAAGCAAAGTCATTGCTCCAAGACCTACTGACCCAGGTGAAGCCTTCTTTGAATGATTTGAGCATGAGTAGTAGAAGCAAGTTTCCTTCATGGGTTGAGCAAAGGGACAAAAAATTGCTTGGGAGAGAAGGTGTGCGTGCCAATGCTGTAGTTGCTGTTGATGGGAGTGGTAATTTTACTAAGGTGATGGATGCTGTGAATGCAGCACCTGACAAAAGCATGATACGCTATGTGATACATATAAAGAAGGGTGTTTACATTGAGAATGTTGTCATTGGTATGGAAAAGTGGAACCTTATGATGATTGGAGATGGCATGGATGCAACTGTTATCACTGGTAACCTGAGTGTTAATGTGAGTTTTACCACGTTCAGGACAGCTACCTTCGGTGTAAACGGGAGAGGTTTCATAGCACAAGATCTTACCTTTGAGAACACAGCAGGGCCAAACAATCACCAAGCAGTAGCATTAAGATCAAACTCTGACCTTTCAATATTCTTCCGATGTGGGATTTATGGTTACCAAGATAGCCTCTATGCCCACACCTCACGACAATTCTATAGAGAATGCAAAATTAGTGGCACAGTGGATTTCATATTTGGCCGTGCTACTGTAGTGTTCCAAAATTGCACAATATTAGCAAGAAAAGGTTTAGAAAGCCAAAAGAACACTATCACAGCTCAAGGGGAAAAACACCTTACAGAATCATCTGGTTTCTCCTTCCAATTCTGCAACATTTCTGCAGATCATGACCTTGTACCCTTTGTTAACACCACCTCAACGTACCTTGGTAGACCCTGGAAAGCATATTCTAGAACAATTTTCATGTCGTCCTACATAAGTGATGTGTTGAATCCAAAAGGGTGGTTAGAGTGGAATGGAACATTGTATTTGAACACTTTGTACTATGCTGAGTATGATAATTATGGACCAGGTGCTAGGCTAGATGGTAGAGTCAAATGGCCAGGATACCATGTGATAGATGATCCTACGAAGGCTTCTAACTTCACTGTGGCCAACCTCATTGAAGGGAATATATGGTTACCTTCAACAGGTGTACCATTCATCCCT 1491 0.4085 SISTITFIIIFLFLFASSEFAGLRSLNVSPSKFIRVVRKVGDDLQKVTSMFKSELSNAKHDPLLFNLISTCLDLLDLSVDQLNWSISAVQSPKGNHNSTGDMKSDLRTCLSAVLANVETCTDSFEDTKRNVKGSIATKIDEAKSLLQDLLTQVKPSLNDLSMSSRSKFPSWVEQRDKKLLGREGVRANAVVAVDGSGNFTKVMDAVNAAPDKSMIRYVIHIKKGVYIENVVIGMEKWNLMMIGDGMDATVITGNLSVNVSFTTFRTATFGVNGRGFIAQDLTFENTAGPNNHQAVALRSNSDLSIFFRCGIYGYQDSLYAHTSRQFYRECKISGTVDFIFGRATVVFQNCTILARKGLESQKNTITAQGEKHLTESSGFSFQFCNISADHDLVPFVNTTSTYLGRPWKAYSRTIFMSSYISDVLNPKGWLEWNGTLYLNTLYYAEYDNYGPGARLDGRVKWPGYHVIDDPTKASNFTVANLIEGNIWLPSTGVPFIP 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g01163 497 SUPERFAMILY Pectin lyase-like 185 496 IPR011050 -
Pste2g01163 497 Pfam Plant invertase/pectin methylesterase inhibitor 45 137 IPR006501 GO:0004857
Pste2g01163 497 Pfam Pectinesterase 188 485 IPR000070 GO:0030599|GO:0042545
Pste2g01163 497 ProSitePatterns Pectinesterase signature 2. 332 341 IPR033131 -
Pste2g01163 497 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 29 146 IPR035513 -
Pste2g01163 497 PANTHER PECTINESTERASE 42 489 - -
Pste2g01163 497 Gene3D - 183 497 IPR012334 -
Pste2g01163 497 Gene3D Invertase/pectin methylesterase inhibitor family protein 23 155 IPR035513 -
Pste2g01163 497 SMART PMEI_2 29 152 IPR006501 GO:0004857
Pste2g01163 497 CDD PMEI-like_4 12 156 - -
Pste2g01163 497 FunFam Pectinesterase 182 497 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g01163 Pste-Chr2 12679546 12686581 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g01163 9 496 Carbohydrate Esterase AT3G43270 53.606 0.0 556