Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g01153 CAAAAACAACACACTCACTCTCTCACTCACTTCCTCGGAACTAAAATCTCGCCTCTCTCACTAATCCTAATTGCCCAAAGGCAAACATAATCAATGTCCCCAAACGGTAACCGCTACGACAGCTCTAAGATTTCCACCTAAATCATACCCTTATCTTCCTTAATTCAAAACTCTTTGGTAAAGTGGCTTAATCACTTAATCATATAAAACACCTCAGAGACGACTTTTTTCGCATTGTTGTTCATTTGGGTCGCCGAATCTCTTTCAAAAACACATTTTTTTTCCAAAATGGATGACCTTTCGTCCAATCTTCTATGCCAAGAAAACGAAACGTGTTTGGAAGAAGGAGGTGAAGAATTAGAATACCAATTCGTTGGATCACAACTTGATTGTGGAGTTTCGGAGGATGAGTATGTGGGAAATTTGATTGAGAGAGAGATCGTTCTTGGGTTCAAAAGGGACGAAACTTTGGTGTTTGGGGACTGGGTGAAACGTGCACGCATGGAAGCAATCAATTGGATTCTCAGAACAAGAGCAACATTGGGTTTTCGCTTCGAAACGGCTTATTTGTCAGTGACATACTTCGATCGCTTTCTTTCCAGACGATCCATTGATAGTGAAAAGTATTGGGCAATTCAGTTGCTATCAATTGCATGCCTCTCTCTGGCTGCAAAGATGGAGGAGTGCAATGTGCCAGGGCTATCAGAGTTTAAATTGGATGATTATTCCTTTGAGGGGAAAGTGATTCAGAAAATGGAACTTTTGGTGCTCAGCACATTGGAGTGGAAAATGGGGATCGTAACTCCCTTAGATTTTCTTTCCTATTTCATCAAAAAGTTCTGCAAAGAATCCCCATCCGGTCCTATTTTTTCCAAGACCATGCAACTCATCTTCACCGCAATGAAAGAGTGCAATTTAATGGATCACAAACCATCAGTTATTGCCGCAGCTGCTACTTTGGTGGCAATGGATAAACAATTGACGATAGACGCTGTGGAGTTGAACATGAGTTCAATTTCACAACACAGGCTTCTAGAACCTAAAGATGTATTTGAATACTATAATCTAATTCAAAGATTATATGAGGAGGATACCAAAAGAGACACGCATACGCCTATTGACATGACAGAGAGTTCTCGAGTTACTTCTTCAGCAATGGCAAAGAGAAGAAGACTCACTTTCAGTGATGATGAAGGAAGTAGTCACGGAAAGGGACCGGGCTAG 1224 0.4101 MDDLSSNLLCQENETCLEEGGEELEYQFVGSQLDCGVSEDEYVGNLIEREIVLGFKRDETLVFGDWVKRARMEAINWILRTRATLGFRFETAYLSVTYFDRFLSRRSIDSEKYWAIQLLSIACLSLAAKMEECNVPGLSEFKLDDYSFEGKVIQKMELLVLSTLEWKMGIVTPLDFLSYFIKKFCKESPSGPIFSKTMQLIFTAMKECNLMDHKPSVIAAAATLVAMDKQLTIDAVELNMSSISQHRLLEPKDVFEYYNLIQRLYEEDTKRDTHTPIDMTESSRVTSSAMAKRRRLTFSDDEGSSHGKGPG 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g01153 311 Gene3D - 68 169 - -
Pste2g01153 311 Pfam Cyclin, C-terminal domain 171 271 IPR004367 -
Pste2g01153 311 CDD CYCLIN_AtCycD-like_rpt1 70 166 - -
Pste2g01153 311 Gene3D - 170 233 - -
Pste2g01153 311 SMART Cyclin_C_2 171 290 IPR004367 -
Pste2g01153 311 CDD CYCLIN_AtCycD-like_rpt2 171 261 - -
Pste2g01153 311 SMART cyclin_7 76 162 IPR013763 -
Pste2g01153 311 SUPERFAMILY Cyclin-like 154 244 IPR036915 -
Pste2g01153 311 PANTHER CYCLINS 42 262 IPR039361 -
Pste2g01153 311 FunFam Cyclin-D5-1 66 169 - -
Pste2g01153 311 SUPERFAMILY Cyclin-like 32 168 IPR036915 -
Pste2g01153 311 ProSitePatterns Cyclins signature. 71 102 IPR006671 -
Pste2g01153 311 Pfam Cyclin, N-terminal domain 68 168 IPR006671 -
Pste2g01153 311 FunFam Cyclin-D5-1 170 258 - -
Pste2g01153 311 MobiDBLite consensus disorder prediction 272 311 - -
Pste2g01153 311 MobiDBLite consensus disorder prediction 279 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g01153 Pste-Chr2 12558730 12560427 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g01153 8 221 Core Cell Cycle Gene Families AT4G37630 37.885 4.16e-43 147