LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pste2g01140	ATGTACAAGAGACTACACAGCACAAGTGAAGTAGTGAAGAGAATGCGGGTTGTGTGTTGCTCCAATTCGTCGTCGTTTGGATCAGCTGTCACTGCCACTCTTCCCTCTTTCCCTTGTCCTAGATTCCATTCACCGATCGCCAACTCAACAACACCCTCTTTCATCCGCTGTCGACCACTACGCTCCACTCCTTCATTGAGTGTCCCTCGACAAGTTACGGCAATGGCTTCCAAGAATGCTCAAGTTCAAGAAGACCCGCGCTTAGAGAAAATCGCCGCTGCAATTCGAGTCATCCCTGATTTTCCTAAGCCAGGAATTTTGTTTCAGGATATAACCACGCTGCTTCTTGATACAAAGGCTTTCAGAGACACCATTGACATGTTTGTTGAGAGGTACAGAGATCAAAATGTTAATGTTGTTGCAGGAGTTGAAGCAAGAGGCTTTATATTTGGTCCACCCATTGCATTAGCTATTGGAGCAAAGTTTGTCCCAATGAGGAAACCCAATAAATTGCCTGGGGAGGTTATCTCAGAGGAGTATTCTTTGGAGTATGGAACAGACAAAATGGAGATGCATGTAGGGGCTGTACAACCTGGAGAACGAGCCTTAATCATAGATGATCTTATTGCCACTGGGGGAACGCTAGGTGCTGCAATTAAGCTACTAGAACGTGTTGGGGTGCATGTTGTGGAATGTGCTTGTGTGATTGAATTACCAGAGCTAAAGGGGCGGGAAAAGCTGGGAGGCAAGCCGCTATTTGTCTTAGTTAAAGGCGGGGCGTGA	783	0.4649	MYKRLHSTSEVVKRMRVVCCSNSSSFGSAVTATLPSFPCPRFHSPIANSTTPSFIRCRPLRSTPSLSVPRQVTAMASKNAQVQEDPRLEKIAAAIRVIPDFPKPGILFQDITTLLLDTKAFRDTIDMFVERYRDQNVNVVAGVEARGFIFGPPIALAIGAKFVPMRKPNKLPGEVISEEYSLEYGTDKMEMHVGAVQPGERALIIDDLIATGGTLGAAIKLLERVGVHVVECACVIELPELKGREKLGGKPLFVLVKGGA	260

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pste2g01140	260	CDD	PRTases_typeI	125	257	IPR000836	-
	Pste2g01140	260	FunFam	Adenine phosphoribosyltransferase 1	79	258	-	-
	Pste2g01140	260	NCBIfam	adenine phosphoribosyltransferase	92	256	IPR005764	GO:0003999\|GO:0005737\|GO:0006168
	Pste2g01140	260	PANTHER	ADENINE PHOSPHORIBOSYLTRANSFERASE	80	257	-	-
	Pste2g01140	260	SUPERFAMILY	PRTase-like	92	250	IPR029057	-
	Pste2g01140	260	Pfam	Phosphoribosyl transferase domain	123	241	IPR000836	-
	Pste2g01140	260	Hamap	Adenine phosphoribosyltransferase [apt].	91	258	IPR005764	GO:0003999\|GO:0005737\|GO:0006168
	Pste2g01140	260	Gene3D	-	78	258	IPR029057	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Pste2g01140	Pste-Chr2	12432494	12437590	Dispersed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pste2g01140	75	260	PRT Gene Family	AT1G27450	79.570	4.31e-107	306

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Pste2g01140	2	12432494	12437590	Pste2g01140	2	12432494	12437590	ECH

Showing 1 to 1 of 1 entries