Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g01134 AAAGCATAACATTCCCCTGAGACAGTGGAGTGGAGGCATGAGCTGCAACGGTTGCCGAGTCCTCCGCAAAAGATGCAGCGAGAGATGCGCCCTCAGATCCTCCCTCCAATGGATCCATTCTCCACAGGCCCAAGCCCATGCAACTCTCTTCCTCGCCAAGTTCTTCGGCCGCACCGACCTCATGTTTTTCATCTCCTCCGTCCCCCTCCACTACAGACCCGCGCTGTTTCAGTCTCTGCTGTTTGAAGCCTGCGGACGGACCATTAATCCAGTTAACGGTGCCGTCGGACTGCTCTGTAGCGGTAACTGGCACGTGTGTGAGGCCGCCGTCCACACTGTGCTTGCTGGAGGCGTTATCCGCCCGAATATAGATGAAGCGTCGGACAGACACAGCATGAGCACGTTATCGCCACTGGTGTCGGAGCTCATCGAGGAGTCTGCCAAGAAGAATGACAAAAAGCTTTTGAATCTGTTCGTTTAGTGCGGATACTGAATGCCCCACAAATGCTCAAATTTTGACGCTATTAAATAAGATCTGCTAATCACTA 548 0.5292 MSCNGCRVLRKRCSERCALRSSLQWIHSPQAQAHATLFLAKFFGRTDLMFFISSVPLHYRPALFQSLLFEACGRTINPVNGAVGLLCSGNWHVCEAAVHTVLAGGVIRPNIDEASDRHSMSTLSPLVSELIEESAKKNDKKLLNLFV 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g01134 147 ProSiteProfiles LOB domain profile. 1 107 IPR004883 -
Pste2g01134 147 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 116 - -
Pste2g01134 147 Pfam Lateral organ boundaries (LOB) domain 2 101 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g01134 Pste-Chr2 12353615 12354237 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g01134 1 112 AS2 family AT4G37540 73.214 5.52e-56 173
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Pste2g01134 LOB 7.5e-23 No_clan