Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g01116 ATGATGTTGAAGGTGCACTTCGACGGTGATGGGTTAACTATGATCCGTATAAATAGGCGCATTGAGTATGAACACGTAGCTAGCCACCGCGAAAAGGCTTCTCCGCCACCCGCGCACGCCGATTGGATCAACGATGAGTGCTCCGTCGCGAGGAGAGGAGTCAAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAAGCGAACCGGCTTCTTAAAGAAGAAGAAGCATCATCGTTGTCGTCATCGGAGGAAGAGGTGGCATACGAAGCGGGGGAGAAGATCCTGGTGGTGGATTTTGAGTTTGACACGGTGGACGATGCGAGCGTTCCTCCTTTCTCATGGAAGAAGCTATGGCTGTTCACTGGGCCTGGGTTCCTGATGAGCATAGCGTTTTTGGATCCGGGGAATCTGGAGGGGGATCTCCAGGCTGGGGCCATTGCGGGCTACTCCCTCCTATGGCTCTTGATGTGGGCCACCTTCATGGGCCTCTTGATCCAGCTTCTGTCCGCCAGGGTGGGTGTCGCCACTGGCCGCCACCTCGCCGAGCTCTGCAGGGACGAGTATCCTAATTGGGCCCGCCTCGTGCTTTGGTTCATGGCCGAGCTCGCCCTCATTGGCGCCGACATTCAAGAGGTCATTGGAAGTGCCATCGCCATCCAAATTCTTAGCCGTGGCTTCTTCCCTCTCTGGGCTGGTGTCCTAATTACTGCTTCTGATTGCTTTGTATTTCTATTCCTGGAGAACTATGGAGTGCGGAAGTTGGAGGCTGCTTTTGCAGTTCTCATCGCTGTTATGGCCCTTTCTTTTGCCTGGATGTTTGGTGATGCAAAACCTAATGGAAAAGAGCTTTTAATGGGTAAAATTTTAGCTGATGATGTGGTTGGAATATCACTCTTTCTATATCACCCATCTGCTTTTTTTAATAACTTGCCCTTTTCACTGGCTGTGGGTGTTGTGGGTTGTGTCATTATGCCTCACAATGTATTCCTGCATTCTGCTTTGGTGCAGTCAAGGAAGGTTGATCCTAATAAGAAAGGTCGCGTACAGGAGGCTATCAACTACTATTCAATTGAATCATCTGCTGCACTTGCAGCAGATAGCATAGGATTGGTCAATGCAGGGCATTATCTTGAAGAAAAGTATGGAGGAGGAGTCTTCCCTATTCTTTATATATGGGGAGTTGGGTTATTGGCAGCTGGGCAGAGTAGCACCATCACTGGCACATATGCTGGACAATTCATAATGGGTGGTTTCCTCAACCTCCGTTTAAAGAAATGGTTGAGAGCATTAATCACTCGAAGTTTTGCAATTGTGCCAACTATAATTGTAGCCATTGTTTTTAATAGATCAGAAGCTTCATTGGATGTTTTGAATGAATGGCTCAATGTGCTTCAGTCCATGCAAATTCCCTTTGCTCTGATTCCCCTCCTCACCTTGGTCTCCAAAGAGCAGGTCATGGGAACCTTTAGGGTTGGGCCTTTTCTCGAGAGGGTAGCATGGACTGTTGCTGGACTGATAATAGTAATTAATGGGTATCTCTTGTTAGATTTCTTCATTTCTGAGGTGAATGGCATCTTGCTTGGTCTTTTAGCCTCCTCCTGCACAACAGCCTATGTTGCATTCATTGTATATTTGGTTTCACAGAGCGGTATTCTTCCTTCTTCTTGGGTTAATCGTCTTCACAAGGGATTTTCTTCTACTGGGAATTAAGTAAAAAAAAAATCCCACTCCATAAAAATCTGGAAATAGTACGGGCAAACTTCTGCTAGACAATTTTGCATGAGGAGTTTTGCTTCATACAGCATAAAGTTTATAGAGTTTCTCTAACCTTGCAACCTGGATTAAAGGGAATACAAGGTCAAATAGTTGAAAGCACCTAGATTTAACTGCTCTTCAATTTTGCAACAGACTTACCGAGTTTACCTTCCGTGGGTAACAAGATGGAGATAGCTTCAGAAATGGAAGATGTGGAGAGAGCATCATTACAACTTGTAGGAAGAAATTACTTATTTACCGTCCTACCTCCTACATAGCTGCCTTATTCTTTTTCTAACAAGTTGTGAATTGCTCCATTATTCTTTGATGTAAACAGTTTGTATTTAACTTGGACGAACTGGCTCATGTTCCTTTCATGAAGGAACACGAAGTAGGGACATTCTACCTGCTGAAGGTAGCCAGGTAAGATAGTAGACATAAGCTGTAGTGTAGGGATTACTCAATAGTGCAATGTGGAGTAC 2237 0.4569 MMLKVHFDGDGLTMIRINRRIEYEHVASHREKASPPPAHADWINDECSVARRGVKEEEEEEEEEEEANRLLKEEEASSLSSSEEEVAYEAGEKILVVDFEFDTVDDASVPPFSWKKLWLFTGPGFLMSIAFLDPGNLEGDLQAGAIAGYSLLWLLMWATFMGLLIQLLSARVGVATGRHLAELCRDEYPNWARLVLWFMAELALIGADIQEVIGSAIAIQILSRGFFPLWAGVLITASDCFVFLFLENYGVRKLEAAFAVLIAVMALSFAWMFGDAKPNGKELLMGKILADDVVGISLFLYHPSAFFNNLPFSLAVGVVGCVIMPHNVFLHSALVQSRKVDPNKKGRVQEAINYYSIESSAALAADSIGLVNAGHYLEEKYGGGVFPILYIWGVGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWLRALITRSFAIVPTIIVAIVFNRSEASLDVLNEWLNVLQSMQIPFALIPLLTLVSKEQVMGTFRVGPFLERVAWTVAGLIIVINGYLLLDFFISEVNGILLGLLASSCTTAYVAFIVYLVSQSGILPSSWVNRLHKGFSSTGN 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g01116 569 Pfam Natural resistance-associated macrophage protein 138 365 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pste2g01116 569 Pfam Natural resistance-associated macrophage protein 369 492 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pste2g01116 569 Coils Coil 53 77 - -
Pste2g01116 569 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 75 372 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pste2g01116 569 PRINTS Natural resistance-associated macrophage protein signature 196 222 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pste2g01116 569 PRINTS Natural resistance-associated macrophage protein signature 400 419 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pste2g01116 569 PRINTS Natural resistance-associated macrophage protein signature 226 245 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pste2g01116 569 PRINTS Natural resistance-associated macrophage protein signature 462 481 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pste2g01116 569 PRINTS Natural resistance-associated macrophage protein signature 428 445 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pste2g01116 569 PRINTS Natural resistance-associated macrophage protein signature 251 272 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pste2g01116 569 MobiDBLite consensus disorder prediction 51 85 - -
Pste2g01116 569 NCBIfam metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 115 363 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pste2g01116 569 Hamap Divalent metal cation transporter MntH [mntH]. 103 518 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pste2g01116 569 NCBIfam Nramp family divalent metal transporter 122 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g01116 Pste-Chr2 12132742 12138611 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g01116 57 549 Inorganic Solute Cotransporters AT1G47240 70.986 0.0 728
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g01116 2 12132742 12138611 Pste2g01116 2 12132742 12138611 ECH