Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g01113 TGAAGAAATAGCAGTAAGGACATAAGCAGGAAGAAAGTGATTGAAGAGAGGAGTGGAAAGAAATTTGAAGAAACATGAAAGAAAATTTCTATTTTGATGCCTTCTCATTTACTGTATGTAATGTGAGTCATGTCACTTCCCATCACCTACCACTGATAATTCCATGCCTTCTTATTAACCCCACACCATTTGCCTCTCCTCAGAATTTCATGTGCCTCTTGTGTTCTCCAATTCCCTCCACAGGGCTTGGTGAGTGCCTTTGCTGTGGCCTCCTCCTTCATTTTGGTCAGTGATGAGAGGGGGTCTCAGAACTTCCACTTCAGGTTGGAAACATACACCCTTTTGAGCATTTGACACAACCCAGACAGCAAAATCTCACATTTGGTAGGATTTTGGTAATGGGTTTGAACTTGCGGTGCTACAATGGCTTCACACTCAAGAGGGTTTTCGGAACATAAGAGATCTAGTGTTTAAGTTGCTTCAGGGAAAAGGAGTTGGGGACAAATCTGTGTTGGAACAGGCTGGATGTGTGATTAACTTGCTCAAATCTGGTGTAAGATTTGAGGAGTCCAATTTATTTGGCAGCAGCAAAATGGCATCTGATCTGAATTTGGGATTGTCCAAGAAAACATTTGTTTTTGGACTGAAAGTATGGGTACTAATGGGAATACTAGTTGGGTTGTTCATCATAATCATTCTTGTGGTGCTATCAATATGTCTCACTTTAAGAAAGAAGTTCAGAAGAGTCAATGGAAAGCTTCCACTTAGCCATGTGCTATCTGTTTCAGATGAGATAAAAGAAATCAGAGTTGATCAAGTTTCAGCAAATGATCATCCACAAAATGGTACTTTTATGAGTCTGAATGACAAATTTAGTGAAAGCGAACCTGAGAAGGTTTTGAGCCAAACAAAAAATGGGGACAATAGCAGTCAATCAGGTTCATTTAATCATTTAGATAAAGATGCTAATGGCTCTCAATCTGGTGAAGAAAGTGGTGTTAAGAGCGTTTCTGTATACCGGTCTTCTTCGCATCCTATAACTGCACCATCCCCTTTGTCTGGTCTACCTGAATTCTCCCACCTAGGTTGGGGCCACTGGTTTACATTAAGGGACCTAGAACAAGCAACAAACAGGTTTTCAAAAGACAATGTTATTGGTGAAGGTGGATATGGAATTGTATATCGAGGTCAATTAATCAATGAGAGTCCTGTGGCCATTAAGAAGCTCCTCAATAATTTAGGACAAGCTGAAAAAGAATTCAGGGTGGAAGTTGAGGCTATTGGTCATGTGCGGCACAAGAACTTGGTTCGACTTCTGGGCTATTGTGTTGAAGGCACTCACAGGTTGTTGGTTTATGAGTATGTTAACAATGGCAATTTAGAGCAGTGGCTTCATGGAGCCATGCGGCAGCATGATATTAAATCGAGCAATATTCTAATTGATGAGGACTTTAATGCCAAAATATCAGACTTTGGGTTGGCTAAGTTACTTGGTTCTGGGAAAAGTCATATAACAACCAGAGTTATGGGTACTTTTGGATATGTAGCTCCGGAATATGCCAATTCTGGCTTGCTAAACGAGAAGAGTGATGTTTACAGTTTTGGGGTATTGCTCCTTGAAGCAATTACAGGAAGAGACCCTGTGGATTATAGCCGACCAGCAGCTGAGGTAAATTTGGTTGATTGGCTCAAGATGATGGTGGGGTGTAGACGCTCAGAAGAGGTGTTGGACCCCAACATTGAGACTAGGCCATCGACAAGTTCTCTTAAACGAGCCCTCTTGACCGCTTTGAGGTGTGTTGATCCAGATGCTGAAAAAAGACCAAGGATGAGCCAAGTCGTCCGCATGCTTGAATCAGAGGAATATCCTATACCGCGAGAGGATCGAAGACGCCGCAGGAGCCAGGCAGGAACCATGGAGGTAGAGACTCAGAGGGAGAATTCTGATACAGATAAGAGTGACAATCCAGATTATAAGCCCAATGGCAGAAGGAACCAACATGTGTAGAGCCAGGGATCTCAAAGAATTTTGCATTCTTTTGAGCTTCTGCAAGTTCTGATGCCTGCCACTTTTTAATTGGAAAAAATGGAGAAGGAACCAGTTACTTTGGCATGGTTTATATACCTATTTGTTGTTATAGCTTAGCTGTAGATGTTAGAATGTAGATTATTGTGTATGAATATGGGATTGAACAACTTCCTTGCACTAATGGTGGTGTGTACAGTTCATTACTATTCTTTCCTTTTGTCCTTTCATTTGTTTCATTAGCATGGAGGAACAACTGCCCTTGCTTTCTGGAAGATCAGAAAAAGATAAGCTGC 2322 0.4152 MASDLNLGLSKKTFVFGLKVWVLMGILVGLFIIIILVVLSICLTLRKKFRRVNGKLPLSHVLSVSDEIKEIRVDQVSANDHPQNGTFMSLNDKFSESEPEKVLSQTKNGDNSSQSGSFNHLDKDANGSQSGEESGVKSVSVYRSSSHPITAPSPLSGLPEFSHLGWGHWFTLRDLEQATNRFSKDNVIGEGGYGIVYRGQLINESPVAIKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYCVEGTHRLLVYEYVNNGNLEQWLHGAMRQHDIKSSNILIDEDFNAKISDFGLAKLLGSGKSHITTRVMGTFGYVAPEYANSGLLNEKSDVYSFGVLLLEAITGRDPVDYSRPAAEVNLVDWLKMMVGCRRSEEVLDPNIETRPSTSSLKRALLTALRCVDPDAEKRPRMSQVVRMLESEEYPIPREDRRRRRSQAGTMEVETQRENSDTDKSDNPDYKPNGRRNQHV 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g01113 471 Gene3D Transferase(Phosphotransferase) domain 1 258 436 - -
Pste2g01113 471 MobiDBLite consensus disorder prediction 98 139 - -
Pste2g01113 471 SUPERFAMILY Protein kinase-like (PK-like) 166 428 IPR011009 -
Pste2g01113 471 PANTHER OS01G0323000 PROTEIN 274 451 - -
Pste2g01113 471 FunFam Putative receptor-like protein kinase 164 257 - -
Pste2g01113 471 FunFam Putative receptor-like serine/threonine-protein kinase 273 436 - -
Pste2g01113 471 Pfam Protein tyrosine and serine/threonine kinase 185 269 IPR001245 GO:0004672|GO:0006468
Pste2g01113 471 ProSitePatterns Protein kinases ATP-binding region signature. 188 211 IPR017441 GO:0005524
Pste2g01113 471 Gene3D Phosphorylase Kinase; domain 1 163 257 - -
Pste2g01113 471 ProSiteProfiles Protein kinase domain profile. 182 426 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste2g01113 471 Pfam Protein kinase domain 274 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste2g01113 471 MobiDBLite consensus disorder prediction 101 139 - -
Pste2g01113 471 MobiDBLite consensus disorder prediction 419 471 - -
Pste2g01113 471 SMART serkin_6 182 420 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g01113 Pste-Chr2 12075011 12080015 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g01113 17 423 Trihelix Transcription Factor Family AT1G70460 35.811 7.27e-74 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Pste2g01113 Pkinase 6.7e-22 CL0016