Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g01111 CACATCTCTTCGGTGCATCACTTTGATCTGTTCCAAACTAACAACACAAATATGCAGACCCGTGCTGCAAAGAGAAAGGCCACGCTGGTAGTAGTCGAGAAACAGCATCCCAAGAAACAACGGGTTGTGTTGGGTGAACTTCGCAATTTACCAAATATTACTGTCTCCGAAACTCAAAATCCCCGCAAACGTCGGAAAACCATTTCTCACAATGTTAAGAAACCATTCCTCACAAACACCACCCTTTCTTCCTCCCAGATTGATGAACCTTATTTTTCCGACATCTACCAGTATCTTCGTGTTACGGAGTTGAAGAGAAGACCAATGGTTAATTACATGGATAAAGTTCAGCATGTAGTTACTCCAAACATGAGAGGAATATTGGTGGATTGGTTAGTGGATGTTGCTGTGGAATATAAGCTTCTCTCTGAAACTCTTCATCTCTCTGTGTCTTACATTGATAGGTTTTTATCAGTTAATCCTATGAACAAATCCAGGCTTCAGTTGCTGGGTGTTTCTTCCATGCTCATCGCTTCCAAGTATGAGGAAGTTAGTCCACCCCGTGTGGAGAAATTCTGCAGCATCACTGATAACACTTATGAAAAGGAAGAGGTTGTAGAGATGGAAGCTGAGATACTGAAGTGCTTAAATTTTGAAATGGGCAATCCTACTGCAATCACTTTTCTAAGGAGGTTTTTGGATGTTGCTTCTGAGAATCAAAAAACCCAAAATTTGAAGATTGAATTTCTGAGCTTCTATCTTGCTGAACTAAGTTTGATGGATTATGATTGTATTAGATTCCTGCCTTCTGTTATGGCTGCCTCGGTTATATTTCTTGCCAGATTTATTTTCTCGCCTGAAGTGGATCCTTGGACTTCTTCCCTGTCTGAATTCACGGGTTATATATCTGTTGAGTTGAAAGAATGTGTCCTGACATTGCATGACTTGTATTTTTCAAGAAAGGCAGAGTCCTTCAAAGCTGTTCGGGACAAATACAAACAGCCCAAGTTCAAATGCGTAGCAGACCTGCCTTCCCCTCCACATGTCCCCAGTTGTTACTTTGAGGATCAGAATTCTAATTGTATACTTAGACGGAGGCTGAAGTTGGTTACCCAATTGTTGATGCTGGTTTTGGACTTCTCTGGTTGTACTACTGATGGCTTAGGTCCACTATGATCAAGTAGTGTATCGTAGTAAAGAAAGTACTAAAATTAGGGAACTAAATTATGTGTTGTAGTTAGAGTCAATTGTTAGTTGTAAAAATTATCAGGGATCAGAATTGTTGTTTGTTTATATAAATCAGTG 1305 0.3992 MQTRAAKRKATLVVVEKQHPKKQRVVLGELRNLPNITVSETQNPRKRRKTISHNVKKPFLTNTTLSSSQIDEPYFSDIYQYLRVTELKRRPMVNYMDKVQHVVTPNMRGILVDWLVDVAVEYKLLSETLHLSVSYIDRFLSVNPMNKSRLQLLGVSSMLIASKYEEVSPPRVEKFCSITDNTYEKEEVVEMEAEILKCLNFEMGNPTAITFLRRFLDVASENQKTQNLKIEFLSFYLAELSLMDYDCIRFLPSVMAASVIFLARFIFSPEVDPWTSSLSEFTGYISVELKECVLTLHDLYFSRKAESFKAVRDKYKQPKFKCVADLPSPPHVPSCYFEDQNSNCILRRRLKLVTQLLMLVLDFSGCTTDGLGPL 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g01111 374 SMART cyclin_7 210 298 IPR013763 -
Pste2g01111 374 SMART cyclin_7 113 197 IPR013763 -
Pste2g01111 374 Gene3D - 91 204 - -
Pste2g01111 374 Pfam Cyclin, C-terminal domain 206 328 IPR004367 -
Pste2g01111 374 SUPERFAMILY Cyclin-like 206 330 IPR036915 -
Pste2g01111 374 SUPERFAMILY Cyclin-like 70 203 IPR036915 -
Pste2g01111 374 FunFam Cyclin superfamily protein, putative 203 275 - -
Pste2g01111 374 Pfam Cyclin, N-terminal domain 77 203 IPR006671 -
Pste2g01111 374 Gene3D - 77 325 - -
Pste2g01111 374 SMART Cyclin_C_2 206 329 IPR004367 -
Pste2g01111 374 FunFam G2/mitotic-specific cyclin 91 202 - -
Pste2g01111 374 ProSitePatterns Cyclins signature. 108 139 IPR006671 -
Pste2g01111 374 PANTHER CYCLINS 56 323 IPR039361 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g01111 Pste-Chr2 12038847 12041002 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g01111 3 341 Core Cell Cycle Gene Families AT5G43080 54.519 1.39e-128 371
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g01111 2 12038847 12041002 Pste2g01111 2 12038847 12041002 ECH