Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g01094 TTGGGCACACCATTAAAGGATCTCAACTGGCTCCAAGGACAATGGATGCTTGGACAAATCTGCACAATATTGGTCAAGAAAGGCTTATCAAACCAGAAGAACACAATCACAGTTCAAAGGGAAATCTATCCAACCCAATCATCTGGTTTCTCCTCCAATTCTGCAACATTTAAGCAGATTAATATTTTTCATGGAGTCCTACATATCGATGTGTTAAATCCAAAAGGGTGGCTAAAGCGGAATGACACATTGTATTTGGACACTTTGTACTATGCTGAGTACAATAATTATGGACTTGGTGCTAAGCTTGATGGCAGAGTGAAATGCCCAGGGTACCATGTGATAAATGATTCTAGGCTCCTACATAGTGATGTGTTAAATCCAAAAGGGTGGCTAGAGTGGAATGGAACATTGTATTTGGACACTTTGTACTATGTTGAGTACAGTAATTATGGATCGGGTGCTAAGCTAGATGGCAGAGTGAAATGGTCA 492 0.4024 LGTPLKDLNWLQGQWMLGQICTILVKKGLSNQKNTITVQREIYPTQSSGFSSNSATFKQINIFHGVLHIDVLNPKGWLKRNDTLYLDTLYYAEYNNYGLGAKLDGRVKCPGYHVINDSRLLHSDVLNPKGWLEWNGTLYLDTLYYVEYSNYGSGAKLDGRVKWS 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g01094 164 SUPERFAMILY Pectin lyase-like 20 117 IPR011050 -
Pste2g01094 164 Gene3D - 119 164 IPR012334 -
Pste2g01094 164 Gene3D - 9 118 IPR012334 -
Pste2g01094 164 PANTHER PECTINESTERASE 19 117 - -
Pste2g01094 164 Pfam Pectinesterase 123 164 IPR000070 GO:0030599|GO:0042545
Pste2g01094 164 Pfam Pectinesterase 70 118 IPR000070 GO:0030599|GO:0042545
Pste2g01094 164 SUPERFAMILY Pectin lyase-like 123 164 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g01094 Pste-Chr2 11810056 11814290 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g01094 19 143 Carbohydrate Esterase AT3G43270 36.184 1.24e-20 85.9