Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g01088 GTCTGGTCTTTTTTCCTCTCGTCCGAAGTAGACATGGCAAGCTGTCTCACCCTGACTCAAGTCCCGTCTTCAGTGAATGGAGATGCCATAGGAGCATGAGCATTTCACAGGCTCCACCCCATAAAGTTGGCATGGGTAACCACCATCACTATACAGCACATGAAACCAGCCTATACTGTTCCGAGGAAAACGTAGGGGGAGACGAATTCGACGAGCAGTATAGTTATTACCCATGCTCCGATGCTGAGGCAAATGTTGATAATAATAGAGTAATAAAGTCCCCTGATTTGTGGGACGAACAAGAGTTGACATGGCTGTTGGAGAGAGAACAGCTAAACCCACTAAGCACCTGTCTGGAAGGCAATCCCGCTTTGGAGAGTGGTCGCAGAGAAGCCGTTGAGTGGATCCTCAAAGTGAACTCCCACTACTCCTTCTCTCCCCTCACCGCTCTTCTTGCTGTCAACTACTTTGACCGTTTTCTCTTCAGTTGCCGCTCTCAGAATGCCATTCCCTGGATGACTCAGCTCGCCGCTGTTGCTTCTCTCTCCCTCGCTGCCAAATTCGAGGAGACCCATGTTCCTCTTCTCCTAGACCTTCAAGTGGAGGACACTACATACTTGTTCGAACCCAAGACCATCAAAAGGATGGAGATTTTGCTCCTTTCCACTCTTGGATGGAAGATGAACCCTCCAACCCCTCTCTCTTTTCTTCATTACGTCACAACAAGACTTGCTTCCAAGAACTATCATCTCTGCTCGGACTTCCTCACCAACTGCCAATCCCTTCTTCTCTCCATTCTTCCAGATTCTACCTTTATGAGTTATCTACCATCTGAATTGGCATCGGCTACAATGCTGCACCTTGTGAAAAGCCTGGAGCCTCGTCTAGAAGCAGAATACAAGAGGCGCCTCTTTGGCATTCTCGGAATGGACAAGGAGAAGGTGAAAGAGTGTTGCAAGATGATGATGCGATTGTGGTCAGGGTGCGAGGAGCAGGGGAAGCAATGGTGCATGAAACGCAAGTTTGGGTTGGTTCCAGGAAGCCCAAACGGCGTGATGGACGTGTGCTTTAGCTGTGATAGCTCCAATGACTCATGGGCCGTGGCTGCTGCATCGGTGTCTTCCTCGCCGGAACCTTTGTCAAAGAAGAGTAGGGCCAAGGAGGAGCTTCTACCAAACCGGCTTTAATTTCAACTACCCTCCCCCTCTTATGGAAACATACTCTTACCCTCTTATGGAGTATGGTCTTTCTCTGCTTTAGTAACCGCGTATCTTTCTCTTTCTCTTTTTGACGACCAAGTTAAATTGCCCACCATCTCTGCGTAGCATCACTTCCCCCTCTTCCATAAATTAGATATTAGACCTCTCATCCCTGTAGAACTGGAAGCAGAGATTGTTGGC 1400 0.4857 MSISQAPPHKVGMGNHHHYTAHETSLYCSEENVGGDEFDEQYSYYPCSDAEANVDNNRVIKSPDLWDEQELTWLLEREQLNPLSTCLEGNPALESGRREAVEWILKVNSHYSFSPLTALLAVNYFDRFLFSCRSQNAIPWMTQLAAVASLSLAAKFEETHVPLLLDLQVEDTTYLFEPKTIKRMEILLLSTLGWKMNPPTPLSFLHYVTTRLASKNYHLCSDFLTNCQSLLLSILPDSTFMSYLPSELASATMLHLVKSLEPRLEAEYKRRLFGILGMDKEKVKECCKMMMRLWSGCEEQGKQWCMKRKFGLVPGSPNGVMDVCFSCDSSNDSWAVAAASVSSSPEPLSKKSRAKEELLPNRL 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g01088 363 PANTHER CYCLINS 73 297 IPR039361 -
Pste2g01088 363 CDD CYCLIN_AtCycD-like_rpt2 200 290 - -
Pste2g01088 363 SMART cyclin_7 102 190 IPR013763 -
Pste2g01088 363 Gene3D - 198 289 - -
Pste2g01088 363 MobiDBLite consensus disorder prediction 344 363 - -
Pste2g01088 363 Gene3D - 94 197 - -
Pste2g01088 363 ProSitePatterns Cyclins signature. 97 128 IPR006671 -
Pste2g01088 363 MobiDBLite consensus disorder prediction 349 363 - -
Pste2g01088 363 CDD CYCLIN_AtCycD-like_rpt1 97 194 - -
Pste2g01088 363 SMART Cyclin_C_2 199 329 IPR004367 -
Pste2g01088 363 Pfam Cyclin, C-terminal domain 199 310 IPR004367 -
Pste2g01088 363 Pfam Cyclin, N-terminal domain 84 197 IPR006671 -
Pste2g01088 363 FunFam D6-type cyclin 81 197 - -
Pste2g01088 363 SUPERFAMILY Cyclin-like 66 197 IPR036915 -
Pste2g01088 363 SUPERFAMILY Cyclin-like 182 302 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g01088 Pste-Chr2 11655219 11656878 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g01088 65 357 Core Cell Cycle Gene Families AT5G67260 47.508 9.29e-78 243
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g01088 2 11655219 11656878 Pste7g01061 7 9727113 9729201 ECH
Pste2g01088 2 11655219 11656878 Pste4g01033 4 7949707 7951919 ECH
Pste2g01088 2 11655219 11656878 Pste2g01088 2 11655219 11656878 ECH
Pste8g00909 8 4718292 4720308 Pste2g01088 2 11655219 11656878 PCT