Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g01086 GACAACAAGTATTCTTTCTTTCTCTCTTTTCAACTTCATTTCAATTTCTTTTCTTCAATTTCATCATCGTTGTTATCATTTCTTTGGGTTTCTGCTGAGGTTTATGTGGGTTTTGAGAGTATATATCTCGAGTTTTGGGTGTGTTTCGCGTTTGAATATGCAAAGATTGAAGCTTTCAGCGCAGGGCATGTATCTTCTTACAAATTCTCTGTTTTGTGATTAACAGATTAAAATTGTCTATGGGGATAAAAAGATAATCAATCTGTTATTAACATTCTGAATGATTATCCCTTTTGTACTGATGAGATCCAATAACTATCTTTGTATCGTTATGAGGAGCCAACTTGTGTGTAATGGGTGTAGGAACATCTTGGTTTACCCTAGAGGAGCAACTAATGTTTGCTGTGCATTGTGCAACACCATTACCTCTGTTCCTCCTTCTGGAATGGAAATGTCACAACTTTATTGTGGAGGCTGTAGGACATTGCTAATGCACACACGTGGTGCTACAAGTGTTAGATGTTCCTGCTGTCACACTATTAGCCTTGTACCAGGTATAATATATTTTTCAGTTGCCAGATATACGACCAATAGAAGGCTTCCAACTCCTGTACAGAGACCAAATGGAACAGCCAACTCTGGACCAGTATCTTCTACTTCCTCATCAATGCCTCATTCTCAAAGCCAAACTGTCGTAGTAGAAAATCCTATGTCTGTTGATGCGAGCGGGAAATTGGTGAGCAATGTTGTTGTGGGCGTTACATCAAATAAGAAATGATACTTATTACAATGTTATATAAGTATAAAGGTATTATTTGACTTAAGCTGCTGGTGCTTGAAGATGTTCCTGTATTTGAAATTGCAGCAATAGAAGTTAAAGAATATTTTTTATCTTTCAAAAAATTTTAGAATGATTTAAGTTATATGTTTGTTTCTCTGTTAGAAAGGCCGTTGAGTATCCAACTATTTTCAGTCACCTTCAACATCATAGAAGGTTGTGTTTTCTTAAAAACAAACACACATGATTTAGGTATATATGTATACTATACTTACGAGGACTAGTTGAAAGGGCACAACACTTATCCTTTATGTAATTTGCCAAGATCGTCTTTTTGGTGCAGTTGTATCATAGGGTCTTTCACATTTCGAATTACGAGTTCTAGTGCACATCTGTTTCGTATTCTTTCGTGACTTTATTAATACATGTTAATATTTGTTATGCAAACATATAGCTTGTATAATATACCTACTCTGCTATGTTTGTAGTAATACTGGTCATAAATTAGCACATGTATCAGTTTTTTCGGTGTGTTTCAGCTTTATATGCTGAATATAAATAAGA 1342 0.351 MIIPFVLMRSNNYLCIVMRSQLVCNGCRNILVYPRGATNVCCALCNTITSVPPSGMEMSQLYCGGCRTLLMHTRGATSVRCSCCHTISLVPGIIYFSVARYTTNRRLPTPVQRPNGTANSGPVSSTSSSMPHSQSQTVVVENPMSVDASGKLVSNVVVGVTSNKK 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g01086 165 PANTHER PROTEIN LSD1 20 164 IPR040319 -
Pste2g01086 165 NCBIfam zinc finger domain, LSD1 subclass 60 90 IPR005735 -
Pste2g01086 165 NCBIfam zinc finger domain, LSD1 subclass 21 51 IPR005735 -
Pste2g01086 165 MobiDBLite consensus disorder prediction 107 137 - -
Pste2g01086 165 Pfam LSD1 zinc finger 24 48 IPR005735 -
Pste2g01086 165 Pfam LSD1 zinc finger 63 87 IPR005735 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g01086 Pste-Chr2 11624511 11630776 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-LSD Pste2g01086 zf-LSD1 1.1e-11 No_clan