Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g01078 TAAAAGCCTATTTCCTAGTTTCCTACACCTTGTAAAGTGTTTGCATATGAAATGGACAAATCCCCCCAAAACACACCAAAAACGTAACTCACATCACAGCACCTAAATCCCTTCACCCTCCTCTGAGGTTGGTCAAGCAATGCCGAACCGCATTCTTCCACATCTATTGTTCCTGCTGCTTCTGTTATTGCACGCGTCCAAAGCACATTGCTCCAAACTCCAACGCCCTCATCTTCCGCCGTTAGTTTTCCCGGACGCCACCGCCCTCCTCGCGTTTAAACAAAAAGCCGACGTCAACAACCACCTCCATTACTCCCCCGTCACTCGCGGCGGCCTCCGCTTCTGCGCGTGGCAAGGCGTACAATGCAACGGACCAAAGGTGCAGCGTCTCCTTCTCCAAAGCTTAGATCTCGGTGGCGTCTGGCCTCCAAACACACTCACGCGTCTCGACCAGCTCCGAGTCCTAAGCTTGCAGAACAACTCACTCACCGGACCTCTCCCTGACCTCACCGGTCTCTTCAATCTCAAAAGCCTCTTCCTCGACAACAACCACTTCACTGGTTCTCTCCCTCCCTCCCTCTTCTCTCTCCACCGTCTTCGAAACTTGGATTTCTCTCACAACAATTTCTCCGGACCTATCTCCACCGCATTCGCCAACCTAGACCGCCTCCACACCCTCCGTCTCAGTTATAACGCCTTCAACGGTTCTCTCCCTCCGTTTAACCAATCCTCTCTCAAAATATTTCAAATCTCCGCCAACAACCTCTCCGGCGCCATTCCCCTCACTCCAACGCTCTTCCGTTTCCCGCCTTCTTCCTTCTCCTTCAATCCTAATCTCTGCGGCGAAATCATCCGCGTCCAATGCCGTCCAGCGCAGCCTTTTTTCCGACCCGCGCCGCCTCCTCCCGCCGCGCTCGGCCAGAGCGCGCAGGTGCACGGCGTTGATGGAATAATCCGGCAACCGTACGAGAAGAAGCGCCGCGACCGGCGGGCGCTCATAATCGGATTCTCGGCGGCAGTGTTCGTTCTGGTTTGCTCGCTGGCGTGCTTCGCGGCAGCGGTGAGGAAGCAGAGGAGCCGCAGCCAGAAGGATGGGAGGTCGGGGATGATGGCGGCGGATGAGGCGGCAACGGAAGAGGCGGCGGCGGTAATGCGGATGGAAATGGAGAGGGAGCTAGAGGAGAAGGTGAAGAGAGCGGAGGTGGCGAAGAGTGGGAGTTTGGTATTCTGTGCGGGTGAGGCGCAGGTGTATACGTTAGAGCAGCTGATGAAGGGTTCTGCGGAGCTTTTAGGGAGAGGGTGTTTCGGAACAACTTATAAGGCGGTTCTTGATAACCGTGTGATGGTTACTGTGAAGCGGCTTGATGCTGGCAAAATGGCGGCGCATGCAACTAAGGAAGTGTTCGAACGACACATGGAAGCCGTTGGTGGCCTTCGCCACCCCAATTTGGTTCCTCTCAGGGCTTATTTTCAGGCCAAGCATGAGCGGCTCATTATCTATGACTTTCAGCCCAATGGCAGCCTCTTCTCCCTCATACACGATTTGGACTTTGGCCTTTGGCAGTTGGGGCGGGTCGCTGTTAATTACGTTGGCAGATACCTGTTGAATTCGAGACAGCCGTTAGACAGGAGGAAGATCCCACGTCCTGATCAAGGAGTTTCAAAAATCACTGAACCATTTTGGCAGTATGCAGGAGGTGGAACCCAAGGTGGTTCGAGATCAAGCAGGGCAAGGCCATTGCATTGGACATCATGCTTAAAAATAGCAGAAGACGTAGCACAAGGTCTAGCCTTCATTCACCAGGCATGGAGACTGGTCCACGGCAATCTAAAGTCGTCCAATGTTCTACTTGGACCTGATTTTGAGGCATGCATAACAGATTATTGCCTTTCTGTGTTGACACACGCATCCATATTTGATGAAGATGGGGATTCAGCAGCCTGCAGAGCTCCAGAGACTCGCAACCCAAATCATCACCCAACCCACAAATCTGATGTTTATGCCTATGGGATTTTGTTGCTTGAGCTTCTGACGGGAAAATTTCCCTCCGAGCTCCCATTCATGGCACCTGGTGAAATGTCAAGTTGGGTGAGGTCTATAAGGGATGACAATGGAGGTGAAGATAGCCGAATGGACATGCTTCTCCAGGTGGCTACAACTTGTAGCTTGACCTCGCCTGAGCAGAGGCCAACTATGTGGCAGGTCTTGAAGATGTTGCAGGAAATCAAAGAGATTGTACTATTGGAGGATACTAGTGAATTGGACCTACGCAGTAGTAATGCCATGCCTTAATCTTATTTTATTTTTTTCTAAATTTTTTTGGTTTAATTATGTGGTAAACCGTGGATAGAAGGGCAGAATAGTAGTATATTATTAACTTGGGTAAAAATATTAAGAAAGAAATCCATAAATTATACTTTGTTGTATTCGTTAAATGGACTTTACCATCTTGGTATTGACTTTGTAGATCGTGGAGAGCGCACAGCGTCCCTTTTTGGGCTTTGTATATTGCTTCTTGGGTTCTCGAAACTCGAAAGTGAAGTTCAGGGTAAATAATTGTCATTCTTGCTTTAAACTTCATTGAGATTTGTGTTTAGTTCTCTGATTAAGAAAGTCTCAA 2621 0.5002 MPNRILPHLLFLLLLLLHASKAHCSKLQRPHLPPLVFPDATALLAFKQKADVNNHLHYSPVTRGGLRFCAWQGVQCNGPKVQRLLLQSLDLGGVWPPNTLTRLDQLRVLSLQNNSLTGPLPDLTGLFNLKSLFLDNNHFTGSLPPSLFSLHRLRNLDFSHNNFSGPISTAFANLDRLHTLRLSYNAFNGSLPPFNQSSLKIFQISANNLSGAIPLTPTLFRFPPSSFSFNPNLCGEIIRVQCRPAQPFFRPAPPPPAALGQSAQVHGVDGIIRQPYEKKRRDRRALIIGFSAAVFVLVCSLACFAAAVRKQRSRSQKDGRSGMMAADEAATEEAAAVMRMEMERELEEKVKRAEVAKSGSLVFCAGEAQVYTLEQLMKGSAELLGRGCFGTTYKAVLDNRVMVTVKRLDAGKMAAHATKEVFERHMEAVGGLRHPNLVPLRAYFQAKHERLIIYDFQPNGSLFSLIHDLDFGLWQLGRVAVNYVGRYLLNSRQPLDRRKIPRPDQGVSKITEPFWQYAGGGTQGGSRSSRARPLHWTSCLKIAEDVAQGLAFIHQAWRLVHGNLKSSNVLLGPDFEACITDYCLSVLTHASIFDEDGDSAACRAPETRNPNHHPTHKSDVYAYGILLLELLTGKFPSELPFMAPGEMSSWVRSIRDDNGGEDSRMDMLLQVATTCSLTSPEQRPTMWQVLKMLQEIKEIVLLEDTSELDLRSSNAMP 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g01078 717 Gene3D Phosphorylase Kinase; domain 1 339 456 - -
Pste2g01078 717 SUPERFAMILY L domain-like 37 233 - -
Pste2g01078 717 Gene3D Ribonuclease Inhibitor 148 237 IPR032675 -
Pste2g01078 717 Pfam Leucine rich repeat 128 186 IPR001611 GO:0005515
Pste2g01078 717 ProSiteProfiles Protein kinase domain profile. 378 701 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste2g01078 717 Pfam Protein tyrosine and serine/threonine kinase 382 693 IPR001245 GO:0004672|GO:0006468
Pste2g01078 717 SUPERFAMILY Protein kinase-like (PK-like) 382 698 IPR011009 -
Pste2g01078 717 Gene3D Ribonuclease Inhibitor 38 147 IPR032675 -
Pste2g01078 717 FunFam Leucine-rich repeat receptor protein kinase EMS1 96 194 - -
Pste2g01078 717 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 11 697 IPR046959 -
Pste2g01078 717 Gene3D Transferase(Phosphotransferase) domain 1 526 709 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g01078 Pste-Chr2 11568597 11572068 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g01078 39 715 Receptor kinase-like Gene Family AT5G43020 50.432 0.0 623
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pste2g01078 PK_Tyr_Ser-Thr 1.4e-28 CL0016