Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g01073 ATTGGAACTGAACGATGCAGAATGCCTAAAACCCTAACCTCATAAACCTCCATTCCCGCCACACTCACTCTTCTCCGCAACGCGATGAACTTCAGGTTCCAGAACCTCTTGGGAGCCCCCTACAGAGGGGGCAACACCGTCATTTCCAACAACACCGTGCTACTCTCCCCAATCGGTAACCGCGTCGCCGTCACGGACCTCCTCAAATCCGAAACCACCACCCTCCCCATCCAATCCTCCTCCAACGTCTCCCTCATCGCCGTCTCCCCCGACGCCACGTTCCTCCTCACCGTCGACGACCGCAACCGCTGCCACTTCATCAACCTCCGCCGCCGCGTCCTCCTCCACCGCATCTCCTTCAAGCACCGCGTCGCCGCCGTCGAGTTCTCCCCCGACGCCACCCTCATCGCCGTCGCCGCCGGCAAGCTCGTCCAGATCTGGCGCTCCCCCGCCTTCCGTCGCGAGTATTTCCCCTTCGAGCTTGTTCGCACCTTCGCGGACTTCGACGCCAAGGTTAACTCTCTCGATTGGAGCCCTGGCTCGAAGTACCTCATCGTAGGGTCCAAGGATTTAACCGCGAGGATTTTGTGTTTGAGGAAATTGAATAGTGGTGGTGTTAAGAGAAAGCCGTTTTTGCTCCTAGGGCATAGGGATTCTGTTGTAGGTTCCTTTTTTTGCGTCAATTCGAAGAGTAATAGGGTTTTTAGGGCTTATACGGTTACTAAGGATTGTTATTTGTTTAGCTGGGGTTTTACTTCTGATGATGATGAAATCGATGGTGGTGAGGTTGGTGAGGGTGCGGAGCCTCCCTCGCCGGGGACGCCGGAGAGAGATGTGGAAGGGAATTTGGAGGTTAGTGAGAGTGATGGTGTGAAGAAGAGAAAGAGAAAGAGTGTTGATGTTGTTGAGGATGGTGATGAGGCTTACTTGAGTAGAGGAAAGTGGCAGTTGTTGAGGAAGGATGGGTTTATGCAGGGATCCGCGAGAGTGACTGCTTGTGATTATCATAGAGGGTTGGATATGTTAGTTGTTGGATTTTCTAATGGCGTGTTTGGGTTGTATCAGATGCCGGATTTTGTGTGCATTCACTTGTTATCTATTTCGAGGGAGAAGATCACCTCTGCCGTGTTTAATGAGCTTGGGAACTGGTTGACCTTTGGCTGTGCCAAATTGGGCCAGCTTCTGGTATGGGAATGGCGGTCTGAGAGCTACATTTTGAAGCAGCAGGGTCACTACTTTGATGTGAATTGTGTTGCATATTCTGCCGATTCGCAGCTCCTTGCTACCGGAGCAGATGATAATAAAGTGAAGGTGTGGACTCTTTCCTCAGGCTTTTGCTTTGTTACATTTTCTGAGCATACTAATGCGGTCACGGCTCTACATTTTATGGCAAGTAACAATTGCCTGCTTAGTGCATCTCTTGACGGGACCATTCGGGCATGGGATTTATTACGTTACCGGAATTTTAGGACATTTACGACCCCTTCTTCAAGGCAGTTTGTTTCTTTGACAGCTGATCAAAGTGGTGAAGTGATATGTGCTGGCACTTCAGATTCCTTTGAGATTTTTGTTTGGTCAATGAAAACTGGTCGCTTGTTGGAGGTGCTTAGTGGTCATGAAGCTCCTGTTCATGGGCTGGTGTTTTCTCCTACAAGTGTTGTCTTGGCCTCAGCATCACATGACAAAACGGTTCGGCTGTGGGATGTCTTTGATAGTAAAGGTGCAGTTGAAACGTTTACTCACACACATGATGTTCTTACAGTAGCTTATCGTCCAGATGGAAGGCAGTTAGCTTGCAGCACATTAGATGGGCAAATTCATTTTTGGGACCCAATAGATGGTTTGCTAATGTACACCATAGAAGGTTCTAGAGATATTGCCGGTGGGCGTCTTATGACTGACCGTAGATCAGCTGCTAACTCAACTTCAGGGAAGTTTTTTACAACCTTGTGTTATTCAGCTGATGGAAGCTTCATATTAGCTGGGGGAAGTAGCAGATACATCTGCATGTATGATGTTGGAGATCAGGTTTTGCTTCGACGTTTCCAGATAACTCACAATCTCTCATTAGATGGCGTGCTTGACATTTTAAACTCAAAGAATATGACAGAAGCTGGCCCTCTAGATTTGATTGATGATGACAACAGTGATATTGAAGAAGGTGTTGACAAACAAACCCGAGAGAAACTGGGATTTAACTTGCCAGGATCTTTGCCTAACCGTGGAAGACCTATTATTCAGACAAAATGTCTGAGAATTGCTCCTACAGGGCGTAATTTTGTTGCAGCAACAACTGAGGGAGTTTTGGTTTATTCTGTTGATGAATCATTCATATTTGATCCAACTGACCTAGACATAAATGTTACACCAGAGGCAGTTGAAGAATCTCTTCGTGAAAATCAACCAAGTAAGGCCTTGATTCTTAGCCTTCGCCTGAACGAGGATTCTTTCATTAAAAAATGTATACTTGCGGTTAGTCCAGCAGATATTCCAGCAGTTGCTACATCAATCCCTTACAAATATATCCAGCGATTAGTCGAGGCACTTGCAGATCTGCTAGAAAACTGTCCGCATTTGGAATTTATACTTAGATGGTGTCAGGAGCTCTGCAAAGCCCATGGGAATTCTATTCAGCAAAACTCTAGAAATCTCTTACCATCATTAAAATCTTTGCAGAAAGCAATCACTAGAATTCATCAAGATTTAGCAGATACATGTTCCTCCAATGAATACATGCTGCGATATTTGTGCTCTTCTGGTACCAAGAAATGACTGTCAAGAATTCAAAAGCTTGAATTTAGCAACTTTGCTCATGAAGGAAGAATCCTTGTCCAAGCTGATTGTATCATTTTAATGCAGTAACTGCTGAGTATCATTTGGAAATGGCAACTGTCAACCTCTGCAAAATCAAGCAACATTTTGATGTAGTGTAGTCGCCCGTACACTCCCCTGCTTCCCATTTCCAAAGGAGTTTATCCTTGAATCACGTTTCATTTTCAGGTAAGTGGGGCGTCTAGGTTTGTTTCATGGCCTATTTGCAATTCAACCAAGGTAGTGGCTGTTAACAGATTGCAGAGGTTTGAAAACCCAGCTTGATATACACAGCAGTGATTTTTGAAATCAAATATTTTAGAATCAATGAATGAAAAATGTTAGAATAGACATTTTGGTTAGAAATTTTGCCATGATAATATAACTTATTTTTTGATTCTCGGATTGGTAAGTTGTTTTGCCACTTTATTTCGTCTACCGACCACCTTTTAGTTGCATCAAATGGAGGTCTATTTTTTCTTGTATTATACCATTGTTGTTATTTATAAATGAAATTTATTGTTTGCAATTAGGGTAAAAAACACTTTCCGCC 3364 0.4453 MNFRFQNLLGAPYRGGNTVISNNTVLLSPIGNRVAVTDLLKSETTTLPIQSSSNVSLIAVSPDATFLLTVDDRNRCHFINLRRRVLLHRISFKHRVAAVEFSPDATLIAVAAGKLVQIWRSPAFRREYFPFELVRTFADFDAKVNSLDWSPGSKYLIVGSKDLTARILCLRKLNSGGVKRKPFLLLGHRDSVVGSFFCVNSKSNRVFRAYTVTKDCYLFSWGFTSDDDEIDGGEVGEGAEPPSPGTPERDVEGNLEVSESDGVKKRKRKSVDVVEDGDEAYLSRGKWQLLRKDGFMQGSARVTACDYHRGLDMLVVGFSNGVFGLYQMPDFVCIHLLSISREKITSAVFNELGNWLTFGCAKLGQLLVWEWRSESYILKQQGHYFDVNCVAYSADSQLLATGADDNKVKVWTLSSGFCFVTFSEHTNAVTALHFMASNNCLLSASLDGTIRAWDLLRYRNFRTFTTPSSRQFVSLTADQSGEVICAGTSDSFEIFVWSMKTGRLLEVLSGHEAPVHGLVFSPTSVVLASASHDKTVRLWDVFDSKGAVETFTHTHDVLTVAYRPDGRQLACSTLDGQIHFWDPIDGLLMYTIEGSRDIAGGRLMTDRRSAANSTSGKFFTTLCYSADGSFILAGGSSRYICMYDVGDQVLLRRFQITHNLSLDGVLDILNSKNMTEAGPLDLIDDDNSDIEEGVDKQTREKLGFNLPGSLPNRGRPIIQTKCLRIAPTGRNFVAATTEGVLVYSVDESFIFDPTDLDINVTPEAVEESLRENQPSKALILSLRLNEDSFIKKCILAVSPADIPAVATSIPYKYIQRLVEALADLLENCPHLEFILRWCQELCKAHGNSIQQNSRNLLPSLKSLQKAITRIHQDLADTCSSNEYMLRYLCSSGTKK 895
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g01073 895 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 422 455 - -
Pste2g01073 895 ProSiteProfiles Trp-Asp (WD) repeats profile. 422 463 IPR001680 GO:0005515
Pste2g01073 895 Gene3D - 281 491 IPR015943 GO:0005515
Pste2g01073 895 Pfam WD domain, G-beta repeat 418 454 IPR001680 GO:0005515
Pste2g01073 895 Pfam WD domain, G-beta repeat 551 582 IPR001680 GO:0005515
Pste2g01073 895 Pfam WD domain, G-beta repeat 134 167 IPR001680 GO:0005515
Pste2g01073 895 Pfam WD domain, G-beta repeat 503 540 IPR001680 GO:0005515
Pste2g01073 895 Pfam WD domain, G-beta repeat 381 411 IPR001680 GO:0005515
Pste2g01073 895 ProSiteProfiles Trp-Asp (WD) repeats profile. 508 541 IPR001680 GO:0005515
Pste2g01073 895 SMART WD40_4 544 582 IPR001680 GO:0005515
Pste2g01073 895 SMART WD40_4 45 80 IPR001680 GO:0005515
Pste2g01073 895 SMART WD40_4 415 454 IPR001680 GO:0005515
Pste2g01073 895 SMART WD40_4 130 169 IPR001680 GO:0005515
Pste2g01073 895 SMART WD40_4 605 644 IPR001680 GO:0005515
Pste2g01073 895 SMART WD40_4 373 412 IPR001680 GO:0005515
Pste2g01073 895 SMART WD40_4 330 370 IPR001680 GO:0005515
Pste2g01073 895 SMART WD40_4 457 498 IPR001680 GO:0005515
Pste2g01073 895 SMART WD40_4 83 120 IPR001680 GO:0005515
Pste2g01073 895 SMART WD40_4 501 540 IPR001680 GO:0005515
Pste2g01073 895 ProSitePatterns Trp-Asp (WD) repeats signature. 527 541 IPR019775 -
Pste2g01073 895 FunFam Periodic tryptophan protein 2 22 254 - -
Pste2g01073 895 ProSiteProfiles Trp-Asp (WD) repeats profile. 380 421 IPR001680 GO:0005515
Pste2g01073 895 PANTHER WD40 REPEAT PROTEIN 1 894 IPR027145 -
Pste2g01073 895 Pfam Dip2/Utp12 Family 785 890 IPR007148 -
Pste2g01073 895 Gene3D - 492 750 IPR015943 GO:0005515
Pste2g01073 895 Gene3D - 23 241 IPR015943 GO:0005515
Pste2g01073 895 PRINTS G protein beta WD-40 repeat signature 399 413 IPR020472 -
Pste2g01073 895 PRINTS G protein beta WD-40 repeat signature 527 541 IPR020472 -
Pste2g01073 895 PRINTS G protein beta WD-40 repeat signature 441 455 IPR020472 -
Pste2g01073 895 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 550 582 - -
Pste2g01073 895 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 380 416 - -
Pste2g01073 895 CDD WD40 333 632 - -
Pste2g01073 895 MobiDBLite consensus disorder prediction 231 264 - -
Pste2g01073 895 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 298 663 IPR011047 -
Pste2g01073 895 SUPERFAMILY WD40 repeat-like 51 382 IPR036322 GO:0005515
Pste2g01073 895 ProSiteProfiles Trp-Asp (WD) repeats profile. 550 582 IPR001680 GO:0005515
Pste2g01073 895 ProSitePatterns Trp-Asp (WD) repeats signature. 441 455 IPR019775 -
Pste2g01073 895 FunFam Periodic tryptophan protein 2 288 491 - -
Pste2g01073 895 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 508 541 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g01073 Pste-Chr2 11472559 11478062 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g01073 479 655 Miscellaneous Gene Families AT5G08390 21.910 1.24e-08 57.0