Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g01067 ATGGGAGAAGAAGAAGGATTACGAGATTGTTGTTCCTCGAATTCGACGATCACCAGGAAGAGCGAGAAACGAAAACAACAAGAAGAGAAGCCGTACAGAGGAATAAGGATGAGGAAGTGGGGTAAGTGGGTGGCCGAGATTAGAGAACCCAACAAGAGGTCCAGGATCTGGTTGGGTTCCTACGCCACCCCTGTCGCCGCCGCACGCGCCTACGACACCGCCGTCTTCTACCTCCGAGGCCCTTCCGCGCGCCTCAACTTCCCCGAACTGCTGTCCCAAGACGATGATGTTTCCACCCAACAGGGCAACATGTCCGCCGATTCAATTCGCAGAAAAGCCACCCAAGTGGGGGCCAGAGTGGACGCGCTCGAAACCGCGCTTCAACAATCCTCCTCCTCACACTCCGCTAATTCCAGCCACCTCACCTCTGACAAACCAGACTTGAACGAGTATCCCAAACCTGAAGATTAG 471 0.5478 MGEEEGLRDCCSSNSTITRKSEKRKQQEEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYATPVAAARAYDTAVFYLRGPSARLNFPELLSQDDDVSTQQGNMSADSIRRKATQVGARVDALETALQQSSSSHSANSSHLTSDKPDLNEYPKPED 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g01067 156 MobiDBLite consensus disorder prediction 1 32 - -
Pste2g01067 156 MobiDBLite consensus disorder prediction 94 110 - -
Pste2g01067 156 Gene3D AP2/ERF domain 31 89 IPR036955 GO:0003700|GO:0006355
Pste2g01067 156 PRINTS Ethylene responsive element binding protein signature 32 43 IPR001471 GO:0003700|GO:0006355
Pste2g01067 156 PRINTS Ethylene responsive element binding protein signature 70 90 IPR001471 GO:0003700|GO:0006355
Pste2g01067 156 MobiDBLite consensus disorder prediction 18 32 - -
Pste2g01067 156 CDD AP2 32 90 IPR001471 GO:0003700|GO:0006355
Pste2g01067 156 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-1-RELATED 12 156 - -
Pste2g01067 156 SMART rav1_2 31 94 IPR001471 GO:0003700|GO:0006355
Pste2g01067 156 FunFam Ethylene-responsive transcription factor 2 30 89 - -
Pste2g01067 156 SUPERFAMILY DNA-binding domain 31 89 IPR016177 GO:0003677
Pste2g01067 156 MobiDBLite consensus disorder prediction 124 145 - -
Pste2g01067 156 Pfam AP2 domain 32 80 IPR001471 GO:0003700|GO:0006355
Pste2g01067 156 ProSiteProfiles AP2/ERF domain profile. 31 88 IPR001471 GO:0003700|GO:0006355
Pste2g01067 156 MobiDBLite consensus disorder prediction 94 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g01067 Pste-Chr2 11395608 11396078 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g01067 25 156 AP2-EREBP Transcription Factor Family AT2G23340 56.944 1.24e-51 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Pste2g01067 AP2 5e-12 CL0081