Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g01060 GCACAATGAAGGTGCATCAGTTCACACGTGGATTCTGGGAGCACGAACCTTTCCTCACGCTTGGGTGCAAGAGATTACGCCCTCTTGCTCCCAAGCTTCCCAACACCCACACTTGTACTACTCCTTCCGTTCCTTTCGACCTCAAGAGCTTCATCAAGCCAGACAGTGGCCCCAGAAAGCCCGTTTCCTCTGACCACAATAAGCAAGATCCATCTTCATCCCATGCCCAGGTAGAAACGCATCCAGGAGGGACCCGGTGGAATCCGACGCAAGAACAGATAGGCATACTAGAGATCCTGTACAAAGGAGGGATGCGAACACCGAATGCTCAACAGATAGAGCAGATCACGGTCCAGCTTGGAAAGTACGGTAAGATCGAAGGGAAGAACGTTTTCTATTGGTTTCAGAATCACAAAGCACGCGAGAGACAAAAGCAGAAGCGCAACAGCCTTGCCTTTTCTCATACTCCTCGAACTCCCACAATTCATAGTGTTCTTACTTTGGAGACAACAAGGGGGGAAGTAGTAGAGAGGGGCGAGGAGGAGGATAGTCCGTACAAGAAGTGTAGGAGATGGGTATTTGAGTGCTTGGAAGACCAAAGAAGGTGTGAAGAGGAGGGACGTAAAACTCTGGAGCTTTTCCCATTGCACCCGGAAGGCAGATGAAGGGGTTTGAGTTTGATTCACCATTTTGCTTTGCTTTAGTTCCGAAGCTGATTGAATGAATGAATGTGGCTTAATTTGCTTTACTTTTCTTTTTCCTTTGTATTGGGAAAGAAGAAAGACAAAGTTGTCTCTGATCTGTACTCTTCCACTTAATGCTATTCCTGACTTTGGAACCAAA 843 0.4721 MKVHQFTRGFWEHEPFLTLGCKRLRPLAPKLPNTHTCTTPSVPFDLKSFIKPDSGPRKPVSSDHNKQDPSSSHAQVETHPGGTRWNPTQEQIGILEILYKGGMRTPNAQQIEQITVQLGKYGKIEGKNVFYWFQNHKARERQKQKRNSLAFSHTPRTPTIHSVLTLETTRGEVVERGEEEDSPYKKCRRWVFECLEDQRRCEEEGRKTLELFPLHPEGR 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g01060 219 ProSiteProfiles 'Homeobox' domain profile. 78 143 IPR001356 GO:0003677
Pste2g01060 219 FunFam WUSCHEL-related homeobox 4 82 149 - -
Pste2g01060 219 CDD homeodomain 83 144 IPR001356 GO:0003677
Pste2g01060 219 Pfam Homeodomain 83 142 IPR001356 GO:0003677
Pste2g01060 219 Gene3D - 83 148 - -
Pste2g01060 219 SUPERFAMILY Homeodomain-like 79 150 IPR009057 -
Pste2g01060 219 MobiDBLite consensus disorder prediction 47 87 - -
Pste2g01060 219 PANTHER WUSCHEL-RELATED HOMEOBOX 4 1 219 IPR044186 GO:0003700|GO:0010067|GO:0010087|GO:0051301
Pste2g01060 219 MobiDBLite consensus disorder prediction 65 87 - -
Pste2g01060 219 SMART HOX_1 80 147 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g01060 Pste-Chr2 11325992 11327057 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g01060 1 149 Wox Gene Family AT1G46480 65.432 8.42e-64 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Pste2g01060 Homeodomain 4.9e-18 CL0123