Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g01054 TGTCTCTTCTTCAAGAGAAGAACACAACACCCTCAAGCCATGGAAGGAGGTGTACCAGAAGCTGATATGTCTGCTTTCAGAGAATGTTTGTCTCTATCATGGAAAAATCCTTATGTTCTTCGCCTTGCTTTCTCTGCTGGAATTGGAGGCCTTCTTTTTGGTTATGACACTGGAGTTATATCTGGGGCTCTTTTGTATATTAGAGATGAATTCAAGTCAGTTGATAGGAAAACATGGCTGCAGGAAGCTATAGTGAGTACAGCAATAGCTGGAGCTATAGTTGGAGCTTCGGTTGGAGGATGGATAAACGATCGGTTTGGAAGAAAGAAAGGGATTGTTTTAGCAGATACCCTCTTTTTTATGGGGTCTGTTATAATGGCTGCTGCTACAAGCCCAGCAATTCTCATTGTGGGTCGTGTATTTGTTGGCATTGGTGTTGGTATGGCTTCAATGACATCACCCCTCTACATTTCTGAGGCTTCCCCAACAAGAGTAAGAGGTGCCCTTGTGAGCCTTAACAGTTTTCTCATCACTGGAGGACAGTTCCTTTCCTACCTCATCAACTTGGCCTTCACTAAGGCACCGGGAACATGGAGATGGATGTTAGGTGTAGCTGCAGTACCAGCTCTGTTACAAATTTTACTAATGATGACACTTCCAGAATCACCTCGTTGGCTGTATCGCAAGGGCAGGGAAGAGGAAGCAAAATCAATTCTGAAAAAGATTTATTCTTCTCATGAAGTGGAAGGTGAAATTCAAGCTTTGAAGGAGTCAGTTGATATGGAAATTAAGGAAGGAGAATCATCAGAGAAGATCAACATAGTCAAACTTTTGAGAACCACAGCGGTGAGAAGAGGTTTTTATGCAGGCATGGGGCTCTTAATCTTCCAACAGTTTGTGGGAATCAACACTGTTATGTACTACAGCCCCACCATTGTTCAGTTGGCTGGTTTTGCATCTAACAGAACAGCACTTCTTCTATCTCTCATCACCTCTGGTCTTAACGCATTTGGTTCAATTTTGAGCATATACTTCATTGACAAAACTGGAAGAAAAAAGCTTGCTCTGATTAGTTTGACTGGTGTTGTGTTCTCTTTGGCTCTCTTAACTGTCACTTTTCGCGAAAGTGAAATTCATTCCCCAATGGTTAGTGCTATTGAAAGCTCTCAGTTCAATAACAGCATCTGCCCAGATTACAAAACAGCTGGGAACCCTTCTGAATGGACCTGCATGACATGCCTAAAGGGCTCACCTTCTTGTGGTTTTTGTGCTGCTGATGACAAGTTTTTACCTGGGGCATGTTTGATCTCCAATGATGACACAAAAAAGTTCTGTGGCAATGATCATAGAGCATGGTACACTAGAGGATGTCCTAGCAAATATGGTTGGGCTGCTCTAACAGGCCTAGCTCTCTACATCATTTTCTTTTCACCTGGAATGGGAACTGTTCCATGGGTTGTGAACTCTGAAATCTACCCTTTGAGGTATAGAGGAGTTTGTGGAGGAATAGCATCAACAACTGTATGGATTTCCAATCTAATTGTTTCTGAGTCCTTTTTGTCCCTAACAAAAGCTATTGGGACAGCATGGACATTCATGATATTTGGAATTGTGGCTATAGTGGCAATTTTCTTTGTCATTGTTTTTGTACCTGAGACCAAAGGGGTTCCAATGGAGGAAGTGGAGAAGATGCTGGAAGAAAGATCTGTA 1710 0.4234 CLFFKRRTQHPQAMEGGVPEADMSAFRECLSLSWKNPYVLRLAFSAGIGGLLFGYDTGVISGALLYIRDEFKSVDRKTWLQEAIVSTAIAGAIVGASVGGWINDRFGRKKGIVLADTLFFMGSVIMAAATSPAILIVGRVFVGIGVGMASMTSPLYISEASPTRVRGALVSLNSFLITGGQFLSYLINLAFTKAPGTWRWMLGVAAVPALLQILLMMTLPESPRWLYRKGREEEAKSILKKIYSSHEVEGEIQALKESVDMEIKEGESSEKINIVKLLRTTAVRRGFYAGMGLLIFQQFVGINTVMYYSPTIVQLAGFASNRTALLLSLITSGLNAFGSILSIYFIDKTGRKKLALISLTGVVFSLALLTVTFRESEIHSPMVSAIESSQFNNSICPDYKTAGNPSEWTCMTCLKGSPSCGFCAADDKFLPGACLISNDDTKKFCGNDHRAWYTRGCPSKYGWAALTGLALYIIFFSPGMGTVPWVVNSEIYPLRYRGVCGGIASTTVWISNLIVSESFLSLTKAIGTAWTFMIFGIVAIVAIFFVIVFVPETKGVPMEEVEKMLEERSV 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g01054 570 NCBIfam sugar porter family MFS transporter 32 375 IPR003663 GO:0016020|GO:0022857|GO:0055085
Pste2g01054 570 PRINTS Sugar transporter signature 136 155 IPR003663 GO:0016020|GO:0022857|GO:0055085
Pste2g01054 570 PRINTS Sugar transporter signature 50 60 IPR003663 GO:0016020|GO:0022857|GO:0055085
Pste2g01054 570 PRINTS Sugar transporter signature 466 487 IPR003663 GO:0016020|GO:0022857|GO:0055085
Pste2g01054 570 PRINTS Sugar transporter signature 297 307 IPR003663 GO:0016020|GO:0022857|GO:0055085
Pste2g01054 570 PRINTS Sugar transporter signature 489 501 IPR003663 GO:0016020|GO:0022857|GO:0055085
Pste2g01054 570 Gene3D MFS general substrate transporter like domains 33 390 IPR036259 -
Pste2g01054 570 ProSitePatterns Sugar transport proteins signature 2. 141 166 IPR005829 GO:0016020|GO:0022857|GO:0055085
Pste2g01054 570 SUPERFAMILY MFS general substrate transporter 30 566 IPR036259 -
Pste2g01054 570 ProSiteProfiles Major facilitator superfamily (MFS) profile. 42 554 IPR020846 GO:0022857
Pste2g01054 570 Gene3D MFS general substrate transporter like domains 444 570 IPR036259 -
Pste2g01054 570 Pfam Sugar (and other) transporter 43 373 IPR005828 GO:0016020|GO:0022857|GO:0055085
Pste2g01054 570 Pfam Sugar (and other) transporter 461 564 IPR005828 GO:0016020|GO:0022857|GO:0055085
Pste2g01054 570 PANTHER PROTON MYO-INOSITOL COTRANSPORTER 17 567 - -
Pste2g01054 570 FunFam Probable inositol transporter 2 33 394 - -
Pste2g01054 570 FunFam Probable inositol transporter 2 434 570 - -
Pste2g01054 570 CDD MFS_HMIT_like 45 552 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g01054 Pste-Chr2 11289894 11295466 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g01054 14 570 Organic Solute Cotransporters AT1G30220 71.658 0.0 823