Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g01044 AATTGAAGCTCTGAATTAAGGTTTAAAAAAGTAAAAACCCTAGGGTTTTAGGTTGTGAACTGAAGGGTTCAACAGAAGTGAGGAGAGGGAGTGTGAGAGAGTGAGAGAGAGAGAGAGAGTAAGAATGAGTTTGGTAGCAGGTTCATACGAGAAATTCATCTGGGGTTTCACCCTAAATTCCCAATCCCAAACCCTAACCTCTCGCTTCTCCTACCCTTCCCACCTCTCCCCCATCAAGTGCCTCGCCGTCTCCGGCTCCGTCGCGGCCTCCGGTGGCGAGGACGACACCATCCAACTCTACGACCTCTCCACCGCCGCCTCCCTCGGCTCCCTCCACCACCACTCCGCCACCGTCACCGCCCTCGCCTTCTACGCCCCTCCCAACCTCCCCTTCCCCCGCAACCTCGTCTCCGCCGACGCCGCCGGCCACCTCTCCATCTACGACGCCGACGGCTTCGTCCACCTCGCCTCGCTCCCCGTTCACCGCAACGCCGCCATCAACGACCTCGCCCTCCACCCCTCCGGCGAGCGCGCCCTCACCGTCGGCCGCGACGGCTGCCTCGCCGTCGTTAACCTCGTCCGCGGCCGCCGCAACTGCTGCTTGCGCCTCGGCACGGAGGCGAGTTTGGTCAAGTTTGATGACACCGGTGATCGGTTCTTTATGGCGGCCAAGGAGAAGGTTTCGGTTCACCAGACCGAGGATGCGAAGATTTTGTTTGAATTGGAATGCTCCAACCCTGTTCTATGCGCTGCACCTGCTAGGAATGGACTTCTCTATACTGGTGGTGAGGACAGAAATATCACAGCATGGGACATTAAGACTGGAAAAGTTGCATATTGCTTGGAAGAAGCACATGCTGCCCGTGTAAAAGGTATTGTTGTGCTCACCAATAGTGATGGTGCTAAGGATGATGACCCTTACCTAGTGGCATCTGCATCATCTGATGGCATTGTACGTGTCTGGGATGTTCGAATGGCTGCTAGAGAGAAGCCATTAGCTGAATATAAGACAGGATCAAGATTGACATGCCTTGCTGGATCACATTTAAAATTTAAACGACCACTACCCCAGGCTGGAAAGAGTAAATCAAAACAACAACGAGCCCAGTAAATCAAAGGTACAGAATCAAACAATGGAAGGTTAGTAGCTTTGTAGATGGCAATATGGCTATGGAAAATTTTGACCCTTTGGAAGCCGTGACTGCATCCCATTGCATTTAGAAATCTATTGCTGCTTGGGTCAAGTTGATTCGTTGTATGAGTTGCAAGATGGCAATTATGTAATTTTGACCCTTCTCGTTCTGCACTTCCTCGTGACATCCAACTGCAATTTTTATATAGTAAATCTTTACTTCTAACTGGGCATGTGGGCTATTTTTTAAAGTATTTTTAAAGTTGAAACAGGAAAAGTTAATGCCTGTATAATTCTTCATCTATACAATATTTTATTCTAGCCTGGTCCATTATTATTATTATTATATT 1482 0.4946 MSLVAGSYEKFIWGFTLNSQSQTLTSRFSYPSHLSPIKCLAVSGSVAASGGEDDTIQLYDLSTAASLGSLHHHSATVTALAFYAPPNLPFPRNLVSADAAGHLSIYDADGFVHLASLPVHRNAAINDLALHPSGERALTVGRDGCLAVVNLVRGRRNCCLRLGTEASLVKFDDTGDRFFMAAKEKVSVHQTEDAKILFELECSNPVLCAAPARNGLLYTGGEDRNITAWDIKTGKVAYCLEEAHAARVKGIVVLTNSDGAKDDDPYLVASASSDGIVRVWDVRMAAREKPLAEYKTGSRLTCLAGSHLKFKRPLPQAGKSKSKQQRAQ 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g01044 328 ProSiteProfiles Trp-Asp (WD) repeats profile. 267 283 IPR001680 GO:0005515
Pste2g01044 328 PANTHER PAK1 INTERACTING PROTEIN 1 1 325 - -
Pste2g01044 328 Gene3D - 187 310 IPR015943 GO:0005515
Pste2g01044 328 Pfam WD domain, G-beta repeat 263 281 IPR001680 GO:0005515
Pste2g01044 328 Pfam WD domain, G-beta repeat 29 60 IPR001680 GO:0005515
Pste2g01044 328 SUPERFAMILY WD40 repeat-like 6 304 IPR036322 GO:0005515
Pste2g01044 328 ProSiteProfiles Trp-Asp (WD) repeats profile. 30 69 IPR001680 GO:0005515
Pste2g01044 328 SMART WD40_4 110 150 IPR001680 GO:0005515
Pste2g01044 328 SMART WD40_4 193 230 IPR001680 GO:0005515
Pste2g01044 328 SMART WD40_4 233 281 IPR001680 GO:0005515
Pste2g01044 328 SMART WD40_4 63 107 IPR001680 GO:0005515
Pste2g01044 328 SMART WD40_4 23 60 IPR001680 GO:0005515
Pste2g01044 328 Gene3D - 2 186 IPR015943 GO:0005515
Pste2g01044 328 PRINTS G protein beta WD-40 repeat signature 47 61 IPR020472 -
Pste2g01044 328 PRINTS G protein beta WD-40 repeat signature 217 231 IPR020472 -
Pste2g01044 328 PRINTS G protein beta WD-40 repeat signature 268 282 IPR020472 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g01044 30 282 Miscellaneous Gene Families AT5G08390 20.463 1.31e-07 51.2