Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g01042 TTCATCTTCCACCTGATTTCTCTCTCCTCTTCTCTAAACATTTTTATCAATCCTTTCCGCACCATTCTCATTCTCATTCTCAGTCTCAGTCTCGCCACTCTCTCTTCCCTTCCAAATTCCAATGGCTCTTCTTCTAGACAACTGTGAAGGCATTTTACTCTCTCTGGACTCTCACAAATCAGTGCCAGCTCCTTTCCTGACCAAGACATACCAACTTGTCGACGATCCCACCACCGATCACATAGTTTCTTGGGGCGAAGACGACACCACCTTCGTGGTTTGGCGTCCTCCTGAGTTTGCTAGGGACCTTCTTCCCAACTACTTCAAACACAACAATTTCTCTAGCTTCGTTCGCCAGCTCAACACCTATGGTTTTAGAAAGATTGTCCCTGACAGATGGGAGTTCGCCAACGAGTTCTTCAAGAAGGGAGAGAAACACTTGCTGTGCGAGATCCATAGAAGAAAAACGGCTCAGCCTCAACAAGGAGGCATGAATCACCATCACCACCATTCTCATTCTCCGTTGGGTGTCAACGTTAACGTTCCCACTTTCTTTCCCTTCTCCAGCAGAGTCAGTATCTCTCCCTCCAATGACTCCGACGACCAAGCCAATTGGTGTGATTCTCCGCCACGTGGCGCCACCTCATTGGTGAACGGTGCAGCCAACTACAACACTTCCGTCACCGCGCTCTCGGAGGACAACGAGAGACTCAGGCGGAGCAACAACATGCTCATGTCGGAACTCGCACACATGAAGAAGCTCTACAATGACATTATCTACTTTGTTCAGAACCATGTCAAGCCAGTGGCTCCAAGCAACTCTTATTCTTCGTCTTTGCTTCTATGCAATACACCTGCTGCTACTCCAATAAGTGGTGGCAATGTTTCAATGATGCAAAGGCCAATGAACCAGCTTCTGGGGTATTATTCTACTAACCCTAAGCAAGGAGCTACTCAAATATTACCTCAATCTCAGACATATGTTGTGAACTCTCCCACCAACACATCAAGGAGTTCTATAACCATTGTTGAAGGGCCCAGCACTAACATGAACAGCTGCAAGACCAAGCTTTTTGGGGTGTCACTGCAGTCCAAGAAAAGGGTGCACCCGGATTATGGATCTAATCCGGAGACCAACAAGGCTCGTTTGGTTTTGGAAAAGGATGACTTGGGCTTGAATCTCATGCCTCCATCCACTTGTTAGTTCTACTCATTAATTCTAAGAAGTATTATATCCCAAGCTAGCTAGCTCTACTTAATTTTCTTTTACTTTGCTTTCATTTGTTTTCTTTTTCTTTTTAATTTTTAAAAAACTCTCAAGTTTTGAGTCTTGGAGGAGGCAGATGATATTGATGGAAACGTGTGTGTGCGTGCGTGGGTTCCTTTGTGTGA 1392 0.4555 MALLLDNCEGILLSLDSHKSVPAPFLTKTYQLVDDPTTDHIVSWGEDDTTFVVWRPPEFARDLLPNYFKHNNFSSFVRQLNTYGFRKIVPDRWEFANEFFKKGEKHLLCEIHRRKTAQPQQGGMNHHHHHSHSPLGVNVNVPTFFPFSSRVSISPSNDSDDQANWCDSPPRGATSLVNGAANYNTSVTALSEDNERLRRSNNMLMSELAHMKKLYNDIIYFVQNHVKPVAPSNSYSSSLLLCNTPAATPISGGNVSMMQRPMNQLLGYYSTNPKQGATQILPQSQTYVVNSPTNTSRSSITIVEGPSTNMNSCKTKLFGVSLQSKKRVHPDYGSNPETNKARLVLEKDDLGLNLMPPSTC 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g01042 360 SMART hsfneu3 21 114 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pste2g01042 360 Gene3D - 17 116 IPR036388 -
Pste2g01042 360 FunFam Heat stress transcription factor B-4 17 115 - -
Pste2g01042 360 Pfam HSF-type DNA-binding 25 114 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pste2g01042 360 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 18 272 IPR027725 -
Pste2g01042 360 PRINTS Heat shock factor (HSF) domain signature 25 48 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pste2g01042 360 PRINTS Heat shock factor (HSF) domain signature 63 75 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pste2g01042 360 PRINTS Heat shock factor (HSF) domain signature 76 88 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pste2g01042 360 Coils Coil 187 207 - -
Pste2g01042 360 ProSitePatterns HSF-type DNA-binding domain signature. 64 88 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pste2g01042 360 SUPERFAMILY "Winged helix" DNA-binding domain 22 114 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g01042 Pste-Chr2 11032208 11033685 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g01042 1 359 HSF AT1G46264 56.316 1.36e-124 360
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Pste2g01042 HSF_DNA-bind 3.1e-32 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g01042 2 11032208 11033685 Pste2g01042 2 11032208 11033685 ECH