Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pste2g01029 | ACCCTAAACCCTAATGCTATCTTCATTAAAATGTTCCGAAAACCCCTTCTCCTCTTCCGGGCCCACGCGAGAAGCGTCCACCGAGCCCCGCCGGACCCCGCTCTGGTGGAGCGCATCAGCCGCGTGCTCCTCCTCCGGCGGCCCGGTGCCCTCCGACGCCTCCCGTTCGAGCCCTCGGACGGCCTCACCGATGCCGTCCTCCGGCGGCTCCGGCTGCACCCCAGCGCCGCCCTCTCCCTCTTCTCCGTGTTGTCCCGGCAGCCCCTCTACCGGCCCCACGCGACGTCCCTCTGCCTCCTCCTCCACATCCTCGCCCGCGCCAAACTGTTCCCTCAAACCCGCTTCTCCCCCACCCTCCTCGACATGCTCCTCAAGGCCTTCTCCCACCGTGGCATGACTCGCCTCGCCCTCCACGTGTTCGACGAAATGTCCCGCCTTTCCCGCACCCCCTCCCTCCCCTCCCTCAACTCCCTCCTCTCCTCCCTCCTCCGCGCCGGCGCCTCCGCCCCCGCGCTTGCCGTCTTCCGCCAAATTGAGCACATGGGGGTCTCCCCTGATGTTTGTATGATCTCCATTGTTGTTAATGCGCACTGCCGTGAGGGCAGTGTGGGCGTTGCCCAGAGGTTTGTTGAGAGGATGGTGGCTCGCGGGTTTGAGGTTAATGTTGTCGTGTATAATGCTTTGGTGGGTGGGTTTATTTGTACTGGGGATGTGGGTGCGGCTGAGAGGGTCGTGGGTTTGATGGAGGGGAGAGGGGTTGTGAGGAGTGTGGTTACTTGGACTTTGTTGATGAAGGGTTATTGCAGACTAGCGAGGGTGGATGAGGCTGAGACTCTGCTTCGGAGAATGGAGGGGGATAAGGGGTCTGTTGTGGATGAGAAGGTTTATGGGGTGTTGGTTGATGGGTATTGTAAGCTGGGTAGGATGGATGATGCGGTTAGGATTCGAGATGAGATGGTCAAGGTGGGGTTGAGGGTGAATGTGTTTGTTTGTAATGCTTTGGTTAATGGGTATTGCAAGAAGGGGCAGGTTGGGAAGGGTGAGGAGGTGTTTAGGGGGATGGTGGATTGGAATGTGAGGCCGGATTGTTATAGCTATAATACGCTGTTGGATGGGTATTGCAGGGAAGGGAGGATGGGTGAGGCTTTTGGGCTTTGTGAGGAGATGTTGAGGGAGGGGGTTGATCCGTCCGTTGTGACCTATAATATGGTTCTCAAGGGGTTGGTTGATGTGGGGTCTTACGAGGATGCTTTGAGCCTTTGGGGTTTGATGGTGGAGCGAGGTGTGGCGCCCAATGAGGTTACCTATTGCACTTTGCTTGATTGTTTTTTCAAAATGGGAGATTCTGAGAGGGCTATGAAGCTTTGGAAAGAGATTTTGGGCCGGGGTTTTACCAAGAGTACTGTTGCATTCAATACGATGATTGGTGGGTTGTGTAAGATGGGGAAAGTGGGGGAAGCGAAGGCTGTTTTTGATAGGATGAAGGAACTTGGATGCTCGCCGGATGAAATAACTTATAGGACTTTGAGTGATGGATATTGTAAGATTGGCTGTGTTGTTGAAGCTTTTAGAATTAAAGATGTAATGGAAAAAAGACTGACAGTTTCTCCTTCCATTGAAATGTACAACTCTCTTATTAATGGACTTTTTAAGTGTCGGAAGTCAGGTGATGTTGCTGGTCTTCTTGGTGAGATGCAGACAAGAGGAATATCACCAAATGCTGTTACTTATGGCACCCTGATTTCTGGTTGGTGCAATGAAGAAAAGCTGGACAAAGCTTTAAATTTATATTTTGAGATGATTGAAAGAGGGTTCTCTCCTAACTCAGTGATCTGTAGCAAAATAGTCAGCAGTCTTTATAAGAATGATAGAATCAATGAAGCAACTGTGATCCTAGACAAGATGGTTGATTTTGATCTTCTTACAGTTCATAGATGTTCTGATAAGTCTGTTAAAAATGATTTCATTAGTCTAGAAGCTCAGAGAATTGCTGATTCTCTTGATAAAAGTGTTGTATGTAATTCTCTTCCCAACAGTATTGTGTACAACATAGCTATCTATGGTCTTTGTAAGTCTGGGAAGATTTATGAAGCAAGAAATGTTCTGTCAATTTTGTCGTCTAGAGGTTTTCTGCCAGATAATTTCACATATGGTGCTTTAATTCATGCATGTTCAACTGCTGGTGATGTTGATGCCGCCTTCAACTTAAGGAATGAGATGCTGGAGAGAGGTATTGTTCCAAATATTACTACATATAATGCATTAATAAATGGGCTGTGCAAATTGGGGAATATGGATCGAGCGCTGAGACTTTTCGATAAACTTCCTCAAAAGGGCTTAGTTCCAAATGTTGTTACCTACAATATACTGATAAGTGGTTTCTGTAAGATTGGTGATCTTAATGAAGCCTCTAAATTGAGAGAGAAGATGATAGAAGAAGAAAGGGAATCTGTCAGGCCGTGGTCTGTAATGTGCTTGGAAAGTGAGTTCTCATCAACTATGCCTCAGCATCTCATCCATTTGAAAGAGAAAAACACCTCACTTATAGGGAAAGCGCTGTTTGGTTTAGACTTTGTTATGATAGAATTAGAAGATAAAATGGCTAGGTCAATGACCAAGTGTGGTCTACAATTGTGTGGACTGTCTGGATGCAGAGGAACAGTTGGGGAAGAGATCTTTGAACTGGCAAGGGTAAGAGCATGGCATTGGTTGGGAGCTGGAGTAAAAGGGTTCAGCTACACTTATAGAGACCGGATCATCAATCCACCAAAATGTCTGTAA | 2781 | 0.4797 | TLNPNAIFIKMFRKPLLLFRAHARSVHRAPPDPALVERISRVLLLRRPGALRRLPFEPSDGLTDAVLRRLRLHPSAALSLFSVLSRQPLYRPHATSLCLLLHILARAKLFPQTRFSPTLLDMLLKAFSHRGMTRLALHVFDEMSRLSRTPSLPSLNSLLSSLLRAGASAPALAVFRQIEHMGVSPDVCMISIVVNAHCREGSVGVAQRFVERMVARGFEVNVVVYNALVGGFICTGDVGAAERVVGLMEGRGVVRSVVTWTLLMKGYCRLARVDEAETLLRRMEGDKGSVVDEKVYGVLVDGYCKLGRMDDAVRIRDEMVKVGLRVNVFVCNALVNGYCKKGQVGKGEEVFRGMVDWNVRPDCYSYNTLLDGYCREGRMGEAFGLCEEMLREGVDPSVVTYNMVLKGLVDVGSYEDALSLWGLMVERGVAPNEVTYCTLLDCFFKMGDSERAMKLWKEILGRGFTKSTVAFNTMIGGLCKMGKVGEAKAVFDRMKELGCSPDEITYRTLSDGYCKIGCVVEAFRIKDVMEKRLTVSPSIEMYNSLINGLFKCRKSGDVAGLLGEMQTRGISPNAVTYGTLISGWCNEEKLDKALNLYFEMIERGFSPNSVICSKIVSSLYKNDRINEATVILDKMVDFDLLTVHRCSDKSVKNDFISLEAQRIADSLDKSVVCNSLPNSIVYNIAIYGLCKSGKIYEARNVLSILSSRGFLPDNFTYGALIHACSTAGDVDAAFNLRNEMLERGIVPNITTYNALINGLCKLGNMDRALRLFDKLPQKGLVPNVVTYNILISGFCKIGDLNEASKLREKMIEEERESVRPWSVMCLESEFSSTMPQHLIHLKEKNTSLIGKALFGLDFVMIELEDKMARSMTKCGLQLCGLSGCRGTVGEEIFELARVRAWHWLGAGVKGFSYTYRDRIINPPKCL | 926 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pste2g01029 | 926 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 327 | 361 | IPR002885 | - | |
| Pste2g01029 | 926 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 713 | 747 | IPR002885 | - | |
| Pste2g01029 | 926 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 783 | 817 | IPR002885 | - | |
| Pste2g01029 | 926 | Pfam | PPR repeat family | 537 | 586 | IPR002885 | - | |
| Pste2g01029 | 926 | Pfam | PPR repeat family | 747 | 796 | IPR002885 | - | |
| Pste2g01029 | 926 | Pfam | PPR repeat family | 466 | 515 | IPR002885 | - | |
| Pste2g01029 | 926 | Pfam | PPR repeat family | 677 | 724 | IPR002885 | - | |
| Pste2g01029 | 926 | Pfam | PPR repeat family | 361 | 409 | IPR002885 | - | |
| Pste2g01029 | 926 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 748 | 782 | IPR002885 | - | |
| Pste2g01029 | 926 | Gene3D | Tetratricopeptide repeat domain | 244 | 322 | IPR011990 | GO:0005515 | |
| Pste2g01029 | 926 | Gene3D | Tetratricopeptide repeat domain | 413 | 517 | IPR011990 | GO:0005515 | |
| Pste2g01029 | 926 | Gene3D | Tetratricopeptide repeat domain | 518 | 639 | IPR011990 | GO:0005515 | |
| Pste2g01029 | 926 | Gene3D | Tetratricopeptide repeat domain | 323 | 412 | IPR011990 | GO:0005515 | |
| Pste2g01029 | 926 | Gene3D | Tetratricopeptide repeat domain | 111 | 237 | IPR011990 | GO:0005515 | |
| Pste2g01029 | 926 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 432 | 466 | IPR002885 | - | |
| Pste2g01029 | 926 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 186 | 220 | IPR002885 | - | |
| Pste2g01029 | 926 | Pfam | PPR repeat | 288 | 320 | IPR002885 | - | |
| Pste2g01029 | 926 | Pfam | PPR repeat | 251 | 284 | IPR002885 | - | |
| Pste2g01029 | 926 | Pfam | PPR repeat | 427 | 458 | IPR002885 | - | |
| Pste2g01029 | 926 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 292 | 326 | IPR002885 | - | |
| Pste2g01029 | 926 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 362 | 396 | IPR002885 | - | |
| Pste2g01029 | 926 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 151 | 185 | IPR002885 | - | |
| Pste2g01029 | 926 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 397 | 431 | IPR002885 | - | |
| Pste2g01029 | 926 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 256 | 290 | IPR002885 | - | |
| Pste2g01029 | 926 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 502 | 532 | IPR002885 | - | |
| Pste2g01029 | 926 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 116 | 150 | IPR002885 | - | |
| Pste2g01029 | 926 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 221 | 255 | IPR002885 | - | |
| Pste2g01029 | 926 | PANTHER | ATPASE EXPRESSION PROTEIN 3 | 467 | 831 | - | - | |
| Pste2g01029 | 926 | Gene3D | Tetratricopeptide repeat domain | 657 | 848 | IPR011990 | GO:0005515 | |
| Pste2g01029 | 926 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 538 | 572 | IPR002885 | - | |
| Pste2g01029 | 926 | Pfam | PPR repeat | 123 | 145 | IPR002885 | - | |
| Pste2g01029 | 926 | Pfam | PPR repeat | 330 | 358 | IPR002885 | - | |
| Pste2g01029 | 926 | Pfam | PPR repeat | 191 | 218 | IPR002885 | - | |
| Pste2g01029 | 926 | NCBIfam | pentatricopeptide repeat | 541 | 574 | IPR002885 | - | |
| Pste2g01029 | 926 | NCBIfam | pentatricopeptide repeat | 364 | 397 | IPR002885 | - | |
| Pste2g01029 | 926 | NCBIfam | pentatricopeptide repeat | 434 | 464 | IPR002885 | - | |
| Pste2g01029 | 926 | NCBIfam | pentatricopeptide repeat | 715 | 749 | IPR002885 | - | |
| Pste2g01029 | 926 | NCBIfam | pentatricopeptide repeat | 469 | 503 | IPR002885 | - | |
| Pste2g01029 | 926 | NCBIfam | pentatricopeptide repeat | 223 | 256 | IPR002885 | - | |
| Pste2g01029 | 926 | NCBIfam | pentatricopeptide repeat | 751 | 784 | IPR002885 | - | |
| Pste2g01029 | 926 | NCBIfam | pentatricopeptide repeat | 785 | 813 | IPR002885 | - | |
| Pste2g01029 | 926 | NCBIfam | pentatricopeptide repeat | 575 | 608 | IPR002885 | - | |
| Pste2g01029 | 926 | NCBIfam | pentatricopeptide repeat | 399 | 433 | IPR002885 | - | |
| Pste2g01029 | 926 | NCBIfam | pentatricopeptide repeat | 295 | 327 | IPR002885 | - | |
| Pste2g01029 | 926 | NCBIfam | pentatricopeptide repeat | 258 | 288 | IPR002885 | - | |
| Pste2g01029 | 926 | NCBIfam | pentatricopeptide repeat | 680 | 713 | IPR002885 | - | |
| Pste2g01029 | 926 | NCBIfam | pentatricopeptide repeat | 330 | 363 | IPR002885 | - | |
| Pste2g01029 | 926 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 678 | 712 | IPR002885 | - | |
| Pste2g01029 | 926 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 467 | 501 | IPR002885 | - | |
| Pste2g01029 | 926 | SUPERFAMILY | TPR-like | 329 | 497 | IPR011990 | GO:0005515 | |
| Pste2g01029 | 926 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 573 | 607 | IPR002885 | - |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Pste2g01029 | 312 | 813 | Glycosyltransferase | AT1G05670 | 28.656 | 6.20e-62 | 222 |