LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pste2g01027	CGCGGTGTAGAAAAGCGAAAACTAAAAGGGATTGTTAGTGTGAAGAGACATTTGGACACTTGGCGCATCCAGCAGGGCCTTTGAAACCGAGGAGCGAGGAAGGCAGCCAACCAAGTCTCAAGTCTCGAGTCTCAACTCTCAAGTCTCAACTCTCATCACTCATCACGCATCACTCATCACTCATCAGACCCCAAAATCATACCAAATCAGGAATACCTAAGTAACATAAAATAAATACCCAAGGACAAGGTAAATGCTTCCACCCTCTCCATCTCTTCCCTTACCCCTTTAATTCCTCTTCCACTTCCACTCTACTACTTCTATACCAAAACACACAATTTGTCTTTGCTATCACCATCTAACATGCTACCACCATACTAGCCTTCAATTTACCCTATTTCAATTACCATCTCAACTCATCTTATTCTTCCATATTACTACTCTCAAACTTGGAATTATTTTATACATGTTCCACCTCTCTCGATAAAATAGGTTACCAAAATAAAATGTAAGTTTAAGACACACTCCCGGCAGATTCAACACTCTTTTTTCTTTTTTTTTACTTTGCAAGCTCACCCTAGGTTAGAGCCTCTGCTGTTTGTTCTGTTTCTCTAGGTTTTAATTTGGATGTAAATAGTGTATACTTTTGCAACCATAATCGATGATTTTTGTGAATTTCTTGGTGGAAAATTAAAATTCAGATTAGTTTTAGTTTTGGTGCGGAGGAGCAGGGGAATTGAGATTTGGATCAGGTTGTGATTGCGCTTGCTTGCTTGCTCAGATTTCCGGCATGAATTTCAAGAGCTTCGGGAATGAGGCTGCCGGCGGCGGCGGAGACGGCGGAGGAGGGAGGCCGGCGGCGGGGAACTTTTCCCTGGCGCGGCAGCCGTCTGTGTACTCGCTGACGTTCGACGAGTTCATGAGCAGCATGGGAGGTTCGGGGAAGGATTTCGGCTCCATGAACATGGACGAGTTGCTGAAGAACATTTGGACCGCGGAGGAGGTTCAGACAATGGCGTCGGCTGGGGTCGCTGTCGAGGACGGTGCCGCCGGCGTCAGCCATTTGCAGCGGCAGGGGTCGCTGACGCTGCCGCGGACCCTCAGCCAGAAGACCGTGGATGAGGTTTGGAAGGACATTTCGAAGGACTACGGTGGCCACGGTGGCCCCAACTTGGCCCAGACGCAGCGACAGCCAACGCTAGGAGAGATGACTTTGGAGGAGTTTTTGGTCAGAGCTGGGGTTGTTAGAGAAGATGCGAAGCCGAACGACGCCGTTTTTCTAGATCTGTCTCGCGCTGGGAATAACAGTGCTTTGGGATTGGGGTTTCAGCAGGTGAACAAGGTTGCTACTGCTACCGGTTTGATGGGTAACCGGTTGAACAATGATCCTTTGGTGGGCCTTCAGTCTTCTGCCAACTTGCCATTGAATGTTAATGGGGTGAGATCATCCAATCAGCCACAAATGCAGAGTCCACATTCTCAGCACCAACTCCAGCAGCAGCAACAGCATCAAATATTTCCTAAGCAGACTGCTATGTCTTATGCAGCTGCTCAGATACCGCAGGGAATGGTGAGGGGTGGGATTGTGGGGCTTGGTGGTGATCAGGGTTTGAGTGTGCAAGGTGCAGGGATTGGTATGGTTGGTTTGGCTCCTGCGTCTGTTCATGTTGCTACTGGGTCTCCCGCTGCTAACCAGATGTCCAGTGATAATAAGATGGGGAAGAGCAATGGTGATACCTCGTCCGTTTCGCCAGTTCCTTATGTCTTTAATGGTGGTCTGCGAGGGAGGAAGAGTGGGGGAGCTGTGGAAAAGGTGATTGAGAGGAGGCAGAGAAGAATGATAAAGAATAGAGAGTCGGCTGCCAGGTCGCGGGCTCGCAAGCAGCGATCTGAACTGATGAAAGGTGAAAGATTTTGGGAAGTTACAGTCATGGGAAGTTGTAAAGATCCAGGTTATTACAAGGCTTATACCATGGAATTGGAAGCAGAAGTGGCCAAGTTAAAAGAGGAGAATCAAGAACTTCAGAAAAAACAGGCTGAAATCATGGAAATTCAGAAAAATCAAGTTAAAGAAATGATGAATTTACAACGAGAGGTCAAGAGAAGACGCCTAAGACGAACACAAACTGGTCCGTGGTAGAGTGAAGATTGGACTATGATTGCAGCGTTAAAATATATGTACATAATTATATTAACGTATTCTGTTGTAGATTGAGGCTCTAGTAGTTTTAGATTAGCAGTTGAAGACTTTCACTTCTTACTTGTCTTTTGAACACATGTTAGGGAGGGTATGCACAGTAGCATCGGAATATGTTTTAGCACACATCCAATTTCTTAGACAACCTTGTGCATTAGCCTCTTTCGCTGAATTTGATTCGGTGAGATTGCGTATCTAATATATGCACTTCGTTCACAGTAGTTTAGACCAGTGACTTACAAGTTACGACGAGACCTCCCATTCCAAAAATAGATAAAACTTAG	2481	0.4615	MNFKSFGNEAAGGGGDGGGGRPAAGNFSLARQPSVYSLTFDEFMSSMGGSGKDFGSMNMDELLKNIWTAEEVQTMASAGVAVEDGAAGVSHLQRQGSLTLPRTLSQKTVDEVWKDISKDYGGHGGPNLAQTQRQPTLGEMTLEEFLVRAGVVREDAKPNDAVFLDLSRAGNNSALGLGFQQVNKVATATGLMGNRLNNDPLVGLQSSANLPLNVNGVRSSNQPQMQSPHSQHQLQQQQQHQIFPKQTAMSYAAAQIPQGMVRGGIVGLGGDQGLSVQGAGIGMVGLAPASVHVATGSPAANQMSSDNKMGKSNGDTSSVSPVPYVFNGGLRGRKSGGAVEKVIERRQRRMIKNRESAARSRARKQRSELMKGERFWEVTVMGSCKDPGYYKAYTMELEAEVAKLKEENQELQKKQAEIMEIQKNQVKEMMNLQREVKRRRLRRTQTGPW	449

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pste2g01027	449	ProSitePatterns	Basic-leucine zipper (bZIP) domain signature.	348	363	IPR004827	GO:0003700\|GO:0006355
	Pste2g01027	449	MobiDBLite	consensus disorder prediction	301	320	-	-
	Pste2g01027	449	Coils	Coil	390	439	-	-
	Pste2g01027	449	MobiDBLite	consensus disorder prediction	1	26	-	-
	Pste2g01027	449	CDD	bZIP_plant_BZIP46	345	425	-	-
	Pste2g01027	449	FunFam	ABSCISIC ACID-INSENSITIVE 5-like protein 5	343	426	-	-
	Pste2g01027	449	SMART	brlzneu	341	432	IPR004827	GO:0003700\|GO:0006355
	Pste2g01027	449	PANTHER	CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED	29	449	IPR043452	GO:0003700\|GO:0045893
	Pste2g01027	449	Gene3D	-	343	427	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Pste2g01027	Pste-Chr2	10837583	10842840	Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pste2g01027	29	365	bZIP Transcription Factor Family	AT1G45249	53.444	2.81e-87	270

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Pste2g01027	2	10837583	10842840	Pste2g01027	2	10837583	10842840	ECH

Showing 1 to 1 of 1 entries