Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g01025 ATGCCCCCAGCCACTGGAACCGTTGCATTACACTCTTCCCTCTGCTCCATCCCTTCTGAGAAGCCATCTTCTCCCTTAAGATCAACCCTTCATGTGGCCCCCAAACCCAAAAGCCTCCTCCAAAACCACCCTCTCTACACTCCAACACACACCAAACTCTCCCTTGAATTCAAAGAGAAAATTCTCTGCCTTGAGGTAATGGGTGTTGATGCAGGCAAAGCACTGTCCCAAAACCCTGACCTCCGTACAGCCACCATGGAATCTATTCACTCCATCATCTCCTTCCTCCTCTCCAAAGGCCTTCAAGAAAAGGACTTGCCCAGAATCTTTGGCATGTGCCCCAAGATCCTCACCTCTGACATCAAAACTGACCTCATCCCAGTTTTTGACTTTCTTTTGCATGAACTCAAAGTCCCTGAACAAAGCTTCAGGAGGGTCATCAACAAGTGCCCAAGATTTCTTACTTGTAGTGTGAAAGACCAGCTTAGGCCAGCTTTGATTTACCTAAGGAGACTTGGATTCAAGGATTTGGGTGCCTTGGCTTATCAAGATTCTGTTCTCTTGGTGTCTAATGTAGAAAATACTCTCATTCCTAAACTGAAGTTTTTGGAGACTTTGGGTCTCTCCAAGGATGAGGTTAGGAGTATGGTGTTGAGATGTCCAACACTGCTCACTTTCAGCATAGAAAATAACTTTCAGCCAAAGTATGAGTATTTTGCTGGGGAAATGGGGAGAAAACTGGAGGAGCTAAAGGAGTTTCCTCAGTACTTTGCCTTCAGTTTGGATAACAGGATAAAGCCTAGACACATGGAGGTTTTGCAAAGTGGGATCACTTTACCTTTGTCAGTGATGCTTATAAGCACTGATGAAGAATTCAGGGAGCTGGTAAAGCAGAGAGGTGGTTGA 906 0.4536 MPPATGTVALHSSLCSIPSEKPSSPLRSTLHVAPKPKSLLQNHPLYTPTHTKLSLEFKEKILCLEVMGVDAGKALSQNPDLRTATMESIHSIISFLLSKGLQEKDLPRIFGMCPKILTSDIKTDLIPVFDFLLHELKVPEQSFRRVINKCPRFLTCSVKDQLRPALIYLRRLGFKDLGALAYQDSVLLVSNVENTLIPKLKFLETLGLSKDEVRSMVLRCPTLLTFSIENNFQPKYEYFAGEMGRKLEELKEFPQYFAFSLDNRIKPRHMEVLQSGITLPLSVMLISTDEEFRELVKQRGG 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g01025 301 FunFam Transcription termination factor MTEF1, chloroplastic 132 300 - -
Pste2g01025 301 Gene3D Transcription termination factor 3, mitochondrial 116 299 IPR038538 -
Pste2g01025 301 SMART mt_12 72 102 IPR003690 GO:0003690|GO:0006355
Pste2g01025 301 SMART mt_12 107 139 IPR003690 GO:0003690|GO:0006355
Pste2g01025 301 SMART mt_12 247 278 IPR003690 GO:0003690|GO:0006355
Pste2g01025 301 SMART mt_12 144 175 IPR003690 GO:0003690|GO:0006355
Pste2g01025 301 SMART mt_12 178 209 IPR003690 GO:0003690|GO:0006355
Pste2g01025 301 SMART mt_12 214 246 IPR003690 GO:0003690|GO:0006355
Pste2g01025 301 Pfam mTERF 64 174 IPR003690 GO:0003690|GO:0006355
Pste2g01025 301 Pfam mTERF 187 292 IPR003690 GO:0003690|GO:0006355
Pste2g01025 301 PANTHER CGI-12 PROTEIN-RELATED 35 297 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g01025 Pste-Chr2 10832907 10833812 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Pste2g01025 mTERF 8.7e-29 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g01025 2 10832907 10833812 Pste2g01025 2 10832907 10833812 ECH