Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g01024 TGACGCAATGGTGCGAAAGACTAGCCAGATGGTACCTTCCTCACATGAACACAAATCTCACAAATCAAATCACCGTCCGTAAGAATAATCACAACAGAATCCGCGCTTCCTTCTCTCTCTCTCTGCATCATTTCATCCATTTCTCCCTTTTCCATCGCACCATTAACCATTTCTTTAACTTCCTTATTAGAAAAACCAAACAAACCCTAAATCAAAACATTTTCTCAAATGGATCCAACCGCGATTTACAGCGACTCACCAAACGCGCTCCTCTCCAACGGCCGCGATTGACTCCCACACATCCAACGGGTGTGGCAGCCGCTGAAGAAGAAGAGGAGCTAATAGAAAGAAAGTTTGTTATAGAGAGAGAAAGAAAGGCGGAGAGGATGACGTCACGGGCGGGGCAGGGAAGCGGCGGCGGCGGCGGTGGCAGGACCCGCGTCGGGAAGTACGAGTTGGGTCGGACCCTCGGCGAGGGCAATTTCGCGAAGGTGAAATTCGCGAGGCACTTGGAAACCAAAGAGAACGTCGCTATCAAGATTCTCGACAAGGAGAAAGTTCTCAAACACAAAATGATTACACAGATAAAACGAGAAATATCAACTATGAAACTAATTAGACACCCAAATGTCATACGTATGTATGAGGTAATGGCTAGCAAAACAAAGATATACATTGTATTGGAATTTGTGACTGGTGGGGAGCTGTTTGATAAAATTGCACGCAGCGGGAGACTGAAAGAAGATGAAGCAAGAAAATATTTTCAACAGCTTATTTGTGCTGTGGATTACTGTCATAGTAGAGGTGTTTTCCATAGAGACCTAAAGCCTGAGAATTTATTGCTGGATGCAAAGGGAGTGCTTAAAGTATCAGATTTTGGATTGAGTGCATTGCCTCAACAACTTAGGGAAGATGGGTTACTTCACACAACATGTGGTACGCCAAATTATGTTGCTCCAGAGGTGATTAACAACAAAGGCTACGATGGTGCAAAGGCAGATCTATGGTCATGTGGTGTTATTCTATTTGTTTTAATGGCTGGCTATTTGCCCTTTGAAGAATCCAATCTAACAGCTTTATATAAAAAGATTTTCAAGGCTGAGTTCACATGCCCTCCATGGTTCTCTTCAAGTGCAAAGAAACTAATCAACAGAATCCTTGATCCCAATCCTGCCACTGTATGCCCTCATAGGATTACATTTGCTGAGGTCATTGAGAATGACTGGTTCAAGAAGGGATATAAGCCTCCCGTATTTGAACAGGCTAATGTTAGTCTTGACGATGTAAATTCTATTTTTAGTGAAACTACGGATTCACAAAATCTTGTTGTAGAGAGACGTGAGGAGGGACCTGGGGCAACTGTGGCTCCTGTGACTATGAATGCCTTTGAGCTTATCTCTAAATCTCAAGGCCTCAATCTTAGTAGTCTTTTTGAGAAGCAAATGGGACTAGTTAAAAGGGAAACACGATTCACATCCAAATGTTCAGCGGATGAAATAATTTCAAAAATTGAGCAAGCTGCAGGACCCCTGGGTTTTGATGTTAAGAAGAACAACTGTAAGTTAAAGATTCAAGGGGAAAAGACTGGACGGAAAGGTCATCTATCTGTAAACACTGAGATCTTGGAGGTTGCCCCTTCACTATACATGGTTGAGCTGCGTAAGTCTGAAGGAGATACTCTTGAATTTCACAAGTTCTACAAAAATCTTTCTACTGGGCTGAAAGATATTGTTTGGAAAGCCGAGCCTATCGATGAAGAAAAAGATGGTACCAATTCATCAAAATAATTGTCATCCAAATTTTCATGTCCGTACAAAGTATAGTCACTAGTTGTGTTGTTGGCCAAGTTGGCATTGGTGGATTCTGTCATGGATTTTTTGACTCATCCATATATGAAGATTTCCCTTTATTTGAACTGTATATCAATAATTTTAATTAGTGTGCTGTTACAAACTTTACATATGCAAAAGGGGAAACTAGCTTTTGTTTGTATGACCAGTTGCTGATGAAAATTTGGTTTTGTTTGAACTGAACTGTACATGAATGATTTAATTTTCTTTTTTCATTTTTTGTGCTGTCACAAACTTTACAAAAGCAATAGGGAAAATTAGGCTAGCTAAAGATTTCTACCATTTGTTTGTATGACCAGTTGCTTGTGTAAACAGCTTGTTAGTTTTAATAAAAAGAAATTCTATGAGAAATAAATTCAATTCCA 2215 0.4032 MNTNLTNQITVRKNNHNRIRASFSLSLHHFIHFSLFHRTINHFFNFLIRKTKQTLNQNIFSNGSNRDLQRLTKRAPLQRPRLTPTHPTGVAAAEEEEELIERKFVIERERKAERMTSRAGQGSGGGGGGRTRVGKYELGRTLGEGNFAKVKFARHLETKENVAIKILDKEKVLKHKMITQIKREISTMKLIRHPNVIRMYEVMASKTKIYIVLEFVTGGELFDKIARSGRLKEDEARKYFQQLICAVDYCHSRGVFHRDLKPENLLLDAKGVLKVSDFGLSALPQQLREDGLLHTTCGTPNYVAPEVINNKGYDGAKADLWSCGVILFVLMAGYLPFEESNLTALYKKIFKAEFTCPPWFSSSAKKLINRILDPNPATVCPHRITFAEVIENDWFKKGYKPPVFEQANVSLDDVNSIFSETTDSQNLVVERREEGPGATVAPVTMNAFELISKSQGLNLSSLFEKQMGLVKRETRFTSKCSADEIISKIEQAAGPLGFDVKKNNCKLKIQGEKTGRKGHLSVNTEILEVAPSLYMVELRKSEGDTLEFHKFYKNLSTGLKDIVWKAEPIDEEKDGTNSSK 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g01024 580 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 133 554 - -
Pste2g01024 580 ProSiteProfiles NAF domain profile. 440 464 IPR018451 GO:0007165
Pste2g01024 580 Gene3D Kinase associated domain 1, KA1 445 565 - -
Pste2g01024 580 MobiDBLite consensus disorder prediction 111 132 - -
Pste2g01024 580 FunFam Non-specific serine/threonine protein kinase 129 435 - -
Pste2g01024 580 ProSitePatterns Protein kinases ATP-binding region signature. 142 165 IPR017441 GO:0005524
Pste2g01024 580 CDD STKc_SnRK3 135 394 - -
Pste2g01024 580 SMART serkin_6 136 395 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste2g01024 580 SUPERFAMILY Protein kinase-like (PK-like) 133 418 IPR011009 -
Pste2g01024 580 Pfam NAF domain 442 502 IPR004041 GO:0007165
Pste2g01024 580 ProSitePatterns Serine/Threonine protein kinases active-site signature. 255 267 IPR008271 GO:0004672|GO:0006468
Pste2g01024 580 Pfam Protein kinase domain 136 395 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste2g01024 580 Gene3D Transferase(Phosphotransferase) domain 1 130 444 - -
Pste2g01024 580 CDD CIPK_C 446 561 - -
Pste2g01024 580 FunFam Non-specific serine/threonine protein kinase 439 565 - -
Pste2g01024 580 ProSiteProfiles Protein kinase domain profile. 136 395 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste2g01024 580 FunFam Non-specific serine/threonine protein kinase 128 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g01024 Pste-Chr2 10821364 10831622 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g01024 203 579 CBL-interacting serine-threonine protein kinases AT1G30270 80.940 0.0 639
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Pste2g01024 Pkinase 3.2e-72 CL0016