LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pste2g01012	GTGGGAGGAGCAGATAATGAGAAAAGAATGGCCGTAACAATAGGGAGAGGGTTGTTCCCCATTGAGGCAGGGTTGAGCAGGAGCAGGAGCAGGAGCAGGAGCAGGAGCAGTAAGAGCTTAGATAGAGCAGGAAGATTAGCGTGGCTTAACCATGAGCATGAGCATGAGCATGAGCATGGTGCTGCTGCTGTTACTCCTCGCTCTAGGCTAACTTGTGTGGCAGCGCAGCAGCGACCAACATGGCTCCCAGGACTTGATCCCCCGCCTCATCTTCATGGAACTCTGCCTGGAGATTTTGGCTTTGACCCACTTGGCCTTGCTGAGGATCCCGCTAGCTTAAGGTGGTATGTGCAGGCCGAGCTGCTTCATTCTCGTTTTGCAATGCTTGGGGTCTTGGGAATTCTTGTCACAGATCTACTTCGTGTCACTGGACTTAGTAAGGTACCAGTTTGGTTTGAAGCTGGTGCAGTAAAATACGACCTTGCCAATACACAGACACTCTTCCTTGTTCAACTAATTCTGATGGGGTACAATTCTAGTCTTGAGTTGGGGCTTCATAATTTTATTAACCTTTATAGGCAATTCAATGACCTGAACGTAAAACTTCATGGCTTTTACTTGCACAGGTTTGTCGAAACAAAAAGGTACATGGATTTTATTAACCCCGGATCTCAAGCTAAAGAGGGATCCTTCTTTGGATTGGAAGCTTCACTGCAAGGCTTAGAGCCAGGGTACCCTGGGGGTCCTCTGCTAAATCCTCTTGGTCTTGCTAAAGATATTAAAAACGCTCATGACTTGAAGCTTAAAGAGATTAAGAATGGGCGACTTGCAATGGTGGCAATGCTTGGCATCTTTGTACAAGCGTCTGTGACTCATGTTGGACCAATTGATAACCTTGTGGAGCACCTTTCCAATCCCTGGCATAAAACTATTATTCAGACTCTTGCCAGTTCTAGTTCTTAGTTCTAGGAAGTTGTGTGGCCTGCGCTCATGATAAAAGAAATTACTTTTTTATTTTCCCACCACAAGCATACTCTGGTCAACGATCAAGTTTAGATACAGAGGTCTTGAATCGATTGTTTTCTAATACATTCTCAGTTGACTTAGTTATTTGCTTTGGCGAGAGAATTTTATAGAAATAAAAAATTTGAAATATATTAAA	1162	0.4415	MAVTIGRGLFPIEAGLSRSRSRSRSRSSKSLDRAGRLAWLNHEHEHEHEHGAAAVTPRSRLTCVAAQQRPTWLPGLDPPPHLHGTLPGDFGFDPLGLAEDPASLRWYVQAELLHSRFAMLGVLGILVTDLLRVTGLSKVPVWFEAGAVKYDLANTQTLFLVQLILMGYNSSLELGLHNFINLYRQFNDLNVKLHGFYLHRFVETKRYMDFINPGSQAKEGSFFGLEASLQGLEPGYPGGPLLNPLGLAKDIKNAHDLKLKEIKNGRLAMVAMLGIFVQASVTHVGPIDNLVEHLSNPWHKTIIQTLASSSS	311

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pste2g01012	311	PANTHER	CHLOROPHYLL A/B BINDING PROTEIN	54	306	IPR001344	GO:0009765\|GO:0016020
	Pste2g01012	311	SUPERFAMILY	Chlorophyll a-b binding protein	64	308	-	-
	Pste2g01012	311	Gene3D	Chlorophyll a/b binding protein domain	71	311	-	-
	Pste2g01012	311	Pfam	Chlorophyll A-B binding protein	78	279	IPR022796	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pste2g01012	Pste-Chr2	10746665	10748512	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pste2g01012	53	306	Chloroplast and Mitochondria Gene Families	AT3G61470	40.234	5.44e-55	177

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Pste2g01012	2	10746665	10748512	Pste2g01012	2	10746665	10748512	ECH