Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g00999 ACTGGGAGTTGTTCTTGGCTTTGTCTACAAACAAAAATGGTGGCAGCAGCAGCATACGAGGAGAGTCGTAGGAAGAGATTGGAGGAGAACAGAAAGAGGATGGAAGCCCTCAATCTGCCCCTACTCTCTCAAGCTCTTCACAAATCTCCTTCTCCCAAGAAGTCCTCACCCCTGAAGCAGGTCAAGAATCGCACCATTCAGAAAGAGGTGGTTGTGGTCAGAAGGTCAGGCCGCGTGGCAAACTTGCCCTCTCCTGTTTACAAAGAAGTGGAAATTGATCGCGTGACAATACCTAGAAGAAGAAGCCTTAGTAGAAGTTACGATAAGTACAGGGATTATGCCAATCGGGTCTATGCTTCTGATGAAGCTAGAGAAGAAGCGCTCGAGAAAGCACAAAACTTAATGTCTGCTTTTGAATCTAATCATCCAACCTTCATCAAGTCAATGCTCCAGTCCCACGTCAGCGGCGGATTCTGGCTGGGCCTTCCAGTCCACTTCTGCAAGAACAATCTTCCAAAAAAGGACGAAGTGATGACTTTGATTGACGAGGATGGGAATGAGTATCCGACAATATATTTATCAGGAAAAACAGGACTTAGTGGTGGATGGAGAGGTTTTGCCATTGCTCATGACCTAGCTGATGGGGATGCTATAATTTTTCAGTTAATCAAGCGCAATGCATTCAAGTTCATGTGTTTTAAGTTTACATTATTAGAGCAAATTGTCCTCCAGAAGATAAAGAACTTGAGTGAATTGCGGTTGGAGGTTGGAGCCAGTAAAAAATTAATCTAGGTTCTCTTTATGTGGTGGAAGTAAGGTCGTGGCTTCAGTTTTTGTAGTTTAGCTGGCGTATGAAGTGTAACTTGTTTATAACTGTATGTGAAGGGAATTCTTGCGTCTAATCTGATGATCAATGATGAACTTTTTTTTATCTGATG 938 0.4307 TGSCSWLCLQTKMVAAAAYEESRRKRLEENRKRMEALNLPLLSQALHKSPSPKKSSPLKQVKNRTIQKEVVVVRRSGRVANLPSPVYKEVEIDRVTIPRRRSLSRSYDKYRDYANRVYASDEAREEALEKAQNLMSAFESNHPTFIKSMLQSHVSGGFWLGLPVHFCKNNLPKKDEVMTLIDEDGNEYPTIYLSGKTGLSGGWRGFAIAHDLADGDAIIFQLIKRNAFKFMCFKFTLLEQIVLQKIKNLSELRLEVGASKKLI 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g00999 263 ProSiteProfiles B3 DNA-binding domain profile. 145 236 IPR003340 GO:0003677
Pste2g00999 263 SMART B3_2 145 236 IPR003340 GO:0003677
Pste2g00999 263 SUPERFAMILY DNA-binding pseudobarrel domain 140 237 IPR015300 -
Pste2g00999 263 Coils Coil 17 37 - -
Pste2g00999 263 CDD B3_DNA 143 234 IPR003340 GO:0003677
Pste2g00999 263 MobiDBLite consensus disorder prediction 44 61 - -
Pste2g00999 263 MobiDBLite consensus disorder prediction 41 61 - -
Pste2g00999 263 Gene3D - 120 237 IPR015300 -
Pste2g00999 263 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 63 229 IPR044837 -
Pste2g00999 263 Pfam B3 DNA binding domain 145 231 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g00999 Pste-Chr2 10639146 10647712 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g00999 64 229 B3 DNA Binding Superfamily AT5G42700 56.886 1.96e-58 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Pste2g00999 B3 1.3e-14 CL0405
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g00999 2 10639146 10647712 Pste2g00999 2 10639146 10647712 ECH