Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g00965 CAAAAAAGAGAGGGACATTTCCATTTTCCATGATTCCATTCCGACCATGTGTGTAATAATATTTTGATAGCAAGATGCGTAATAAAAGCAGCAACCATGTATCCACAGAAAATTCTGGAGTTTAGCCTCAACGTGCTCTTTCGTCTCACTCACACTAAATTACAACTCTTCAAATATATATCACACTTTGTTCTCTACTTTTTGCAACGCACCCTCAGAATCTTTGTTCTCTCTCTCTAATCTATAACACAAGCCACAAAAAACACAAAGTATTGCATCAAGATCAGTGATATTAGTTATTTGTTATTGCTATCACTTTCCAGATCAACAAAGAACCGCTACTATATACTCCACGATATTTTGCTGGTGCCACCATGTGTGTGCAGGACGCAGAGAAAGATGTGGATAACACCACAACTAGTTCATGGCCTTTGCATTGTCACCTTTTGCTCACGACCCACATGGACAAAAATGGATCTTTTCTCAGAACTTCCAGGGATGACACCAAGAACAATATGATCAGTGTTCAAAGTTCTTTCCCTCTAGAAAGCATACGTGAGGACGCAGTTATTGCAGACAAGAAACAGAATCTGATGAGTTTTGTTCCAGCTCTTCGGTCTGGAGAGTGGTCTGACATTGGAGAACGCCCTTACATGGAAGATACTCACATATGCATTGGAGATTTGGCAAAGAAGTTTAATTATGATGTACTTGCTGAGGATGTTGTTTCTTTTTATGGAGTATTTGATGGACATGGAGGAAAGAGTGCTGCACAATTTGTCCGTGATAATTTGCCAAGAGTTATTGTTGAGGATGTTAACTTTCCTTTGGAGCTTGAGAAAGTTGTCAAAAGGTCATTTTTGGAGACTGATGCAGCATTTTTAGAAACATCCACTCATGAGCCTTCCCTTTCTTCTGCCAATGCTGGAGATTGCCGGGCTGTCTTGTCTCGCCATGGAAGGGCCATAGAAATGTCTAAAGATCATAGGCCAAACTGCACCAATGAAAGATCACGCATCCAGTCTGTAGGTGGCTTTGTTGATGATGGTTACCTGAATGGCCAGTTAGGTGTTACTCGAGCTCTTGGAGACTGGCACCTTGAAGGAATGAAGGAAATGAGTGAAAGAGGAGGACCACTGAGTGCTGAACCAGAACTTAAATTGATCACATTGACCAAAGAAGATGAATTCTTGATAATTGCTAGTGATGGAATATGGGATGTTTTTAGTAGCCAAAATGCTATAGATTTTGCTAGAAGGAAGCTTCAAGAGCACAATGATGAGAAACTATGCTGCAAGGAGATAGTACAGGAAGCAATCAAGAGAGGATCAACAGATAACTTGACAGTTGTGATGGTATGTTTTAACTTTGATCCACCACCACCTGTGGTTGTGGAAAGAACACGCGTAAGAAGAAGCATATCAGCAGAGGGACTTCAGAACCTTAGATGCCTGCTACAAGAATAA 1466 0.4079 MCVQDAEKDVDNTTTSSWPLHCHLLLTTHMDKNGSFLRTSRDDTKNNMISVQSSFPLESIREDAVIADKKQNLMSFVPALRSGEWSDIGERPYMEDTHICIGDLAKKFNYDVLAEDVVSFYGVFDGHGGKSAAQFVRDNLPRVIVEDVNFPLELEKVVKRSFLETDAAFLETSTHEPSLSSANAGDCRAVLSRHGRAIEMSKDHRPNCTNERSRIQSVGGFVDDGYLNGQLGVTRALGDWHLEGMKEMSERGGPLSAEPELKLITLTKEDEFLIIASDGIWDVFSSQNAIDFARRKLQEHNDEKLCCKEIVQEAIKRGSTDNLTVVMVCFNFDPPPPVVVERTRVRRSISAEGLQNLRCLLQE 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g00965 363 FunFam Probable protein phosphatase 2C 22 65 333 - -
Pste2g00965 363 PANTHER PROTEIN PHOSPHATASE 2C 69 328 IPR015655 GO:0004722|GO:0006470
Pste2g00965 363 SUPERFAMILY PP2C-like 72 331 IPR036457 -
Pste2g00965 363 ProSiteProfiles PPM-type phosphatase domain profile. 81 330 IPR001932 -
Pste2g00965 363 ProSitePatterns PPM-type phosphatase domain signature. 120 128 IPR000222 GO:0043169
Pste2g00965 363 SMART PP2C_4 71 328 IPR001932 -
Pste2g00965 363 CDD PP2Cc 81 330 IPR001932 -
Pste2g00965 363 Gene3D - 77 338 IPR036457 -
Pste2g00965 363 Pfam Protein phosphatase 2C 93 322 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g00965 Pste-Chr2 10234975 10238485 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g00965 49 361 PP2C-type Phosphatase Gene Family AT2G25620 53.172 3.75e-117 343
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBP Pste2g00965 PP2C 1.1e-56 CL0238
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g00965 2 10234975 10238485 Pste2g00965 2 10234975 10238485 ECH
Pste6g03138 6 19672943 19676114 Pste2g00965 2 10234975 10238485 PCT