Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g00952 ATGGCTATACGTGTTACCTTCTCCTTCTCGGGCTACGTCGCCCAAAACCTGGTCTCCTCCGCCGGCGTGCGCGTCGCCAACTCGCGATGCGTCCAAGAATGCTGGATCCGCACGCGCCTCTTCGGCGCCACCCAGAAAACGGATCTAGATTCTTCCGCCGGTGGAGTCCGCAGTTTCGCCAGGACCAAGCCCAAGTCCAACTGCTGGGCCCAGTCCACTTACTCCACCCTCGCCGGGGAGTTTCTCGGCGACGGCTGCCAGAGCCCAATGATCTTGGGCCTGATTTCGATTATGAAGTCAACCGCGGCTGTGTCTGGGTCATCCGCGGGTATTTTCGGTATTTCTCCATTTAAAACGACTTCCATCATTCCCTTCCTGTCCGGTTCCAAGTGGCTTCCTTGCAACGAGTCCGTTCCTGACCCCACCACCTGGGAGGTCGACAAAGGTGGCACGCAACGCGTCGTTTCGGACACAGAGCCCAATTTTGGGAAGACCGGTTGGCTTTCGCGGTTGCTCAACGTCTGTTCCGACGACGCCAAGGCCGCTTTCACTGCCGTCACCGTTAGTTTGCTTTTTAAGTCCTCCTTGGCCGAACCTAGGTCTATTCCCTCTTCTTCTATGTACCCTACTCTCGAAGTAGGTGACCGTGTTCTAACGGAGAAGGTTTCCTTCTACTTTAGAAAGCCTGATGTTTCCGATATAGTTATTTTTAAAGCGCCTCCCTGTTTGCAGGAGTATGGTTTTAGTTCGTCTGATGTATTTATAAAGAGAATTGTAGCTAAGGCTGGGGACACTGTTGAGGTTCGCAATGGGAAACTGCTTGTAAATGGTGCTGCTGAAGAACAGGAATTTGTATTGGAGCCTCTTGCTTATGAGATGGATCCAATGGTTGTGCCTGAAGGATATGTGTTTGTAATGGGAGACAATAGGAACAAGAGCTTTGATTCTCACAACTGGGGTCCCCTCCCAATTGAGAATATTGTTGGTAGATCCATGTTTCGTTACTGGCCCCCATCGAAGGACGACAACCTTCGTAAACTCCCACCTGGGAACAAGCCTGTGGCAGTTTCTTGA 1074 0.5186 MAIRVTFSFSGYVAQNLVSSAGVRVANSRCVQECWIRTRLFGATQKTDLDSSAGGVRSFARTKPKSNCWAQSTYSTLAGEFLGDGCQSPMILGLISIMKSTAAVSGSSAGIFGISPFKTTSIIPFLSGSKWLPCNESVPDPTTWEVDKGGTQRVVSDTEPNFGKTGWLSRLLNVCSDDAKAAFTAVTVSLLFKSSLAEPRSIPSSSMYPTLEVGDRVLTEKVSFYFRKPDVSDIVIFKAPPCLQEYGFSSSDVFIKRIVAKAGDTVEVRNGKLLVNGAAEEQEFVLEPLAYEMDPMVVPEGYVFVMGDNRNKSFDSHNWGPLPIENIVGRSMFRYWPPSKDDNLRKLPPGNKPVAVS 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g00952 357 FunFam Peptidase/ serine-type peptidase 204 335 - -
Pste2g00952 357 Gene3D Umud Fragment, subunit A 192 347 - -
Pste2g00952 357 CDD S26_SPase_I 198 330 IPR019533 GO:0004252|GO:0006465
Pste2g00952 357 PRINTS Bacterial leader peptidase 1 (S26A) family signature 195 211 IPR000223 GO:0006508|GO:0008236|GO:0016020
Pste2g00952 357 PRINTS Bacterial leader peptidase 1 (S26A) family signature 298 317 IPR000223 GO:0006508|GO:0008236|GO:0016020
Pste2g00952 357 PRINTS Bacterial leader peptidase 1 (S26A) family signature 254 266 IPR000223 GO:0006508|GO:0008236|GO:0016020
Pste2g00952 357 NCBIfam signal peptidase I 182 337 IPR000223 GO:0006508|GO:0008236|GO:0016020
Pste2g00952 357 Pfam Signal peptidase, peptidase S26 179 336 IPR019533 GO:0004252|GO:0006465
Pste2g00952 357 PANTHER SIGNAL PEPTIDASE I 138 340 IPR000223 GO:0006508|GO:0008236|GO:0016020
Pste2g00952 357 SUPERFAMILY LexA/Signal peptidase 196 344 IPR036286 -
Pste2g00952 357 ProSitePatterns Signal peptidases I serine active site. 204 211 IPR019756 GO:0004252|GO:0016020
Pste2g00952 357 ProSitePatterns Signal peptidases I signature 3. 303 316 IPR019758 GO:0004252|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g00952 Pste-Chr2 10146627 10148286 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g00952 207 337 MADS-box Gene Family AT1G29960 32.331 9.07e-13 62.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g00952 2 10146627 10148286 Pste2g00952 2 10146627 10148286 ECH