Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g00948 ATGGCATTTGGCTTCGTTCTATTGCTCACCCTATTCCTTCTATCATCCTCTACCTCCCATGCACTTTCCAGTGCCGAAGCCTCTTTCATTGCTCGTCGCCAATTATTACACTTACATGAGAATAATGATTTACCTGACAACTATGCAGATAACTACAAAACATATCTAACCTTCCCTAACCCCAGACTAAAAGGTGCATACATAGCACTCGAGGCATGGAAAAAAGCAATTTACTCAGACCCATCTAATTTCACAGAAAATTGGGTGGGCGCAAAGGTTTGTTCTTACAATGGAGTTTTTTGTGAAAAGGCTTTAGATGATCCCAAGATTGATGTTGTAGCTGGGATAGACCTCAACCATGCAGACATCGCAGGTTACATTCCCCCTGAATTTGGTTTGTTAACCGACCTTGCACTTTTGCATATAAATTCAAACAGGTTTTGTGGGGTTCTTCCAAATAGCTTTTCCAAGCTAAAGCTTCTTTTTGAGCTAGACATTAGCAACAACCGATTTGTTGGGAGATTCCCTGAACCTGTGCTTTCAATTCCAAACCTAACATTCCTTGACCTTAGGTTCAATGACTTTGAAGGGGAATTACCTTCTGAGCTTTTCAACAAAAGCCTCGATGCTATCTTTTTGAACAATAATCGTTTCATTTCCACAATTCCTCAAAACTTTGGATCTTCTCCAGCTTCGGTTGTGGTTTTTGCCAATAACCATTTCACTGGATGCGTGCCTTCTAGCATTGGCAACATGACAAATTTGAACGAGTTGGTTTTGATCAACAACGACCTCACTGGTTGTTTGCCCGCAGACATTGGAAATCTCGAACAAGTTTCTGTATTTGACATAAGCAAGAATAATTTTGTTGGCGTGTTGCCGAAGACCTTTAATGGGCTTAAGAACGTGGAGGTATTGTCCATTGAACACAACAAGCTCACGGGTTTTGTCCCACGTAATGTGTGTAGCTTGTCCAAATTGGTCAACTTCACATTCTCTAATAATTATTTCAATGGTGAGGAAGAAGGTTGTGTCGTGCCTCCTAAGAAAGATGTTGTTTTTGACGATGAAAACAATTGTATACCAAACAGGCCAAAGCAAAAGACTGCAAATGATTGCAACGTGGTGATAAGCAAGCCTATGGATTGTAGCAAAGCACAATGTGGAAAGGGAAACCCATCTACTTCTTCAAAGCCTCCAACTGAGAAACCAACAACACCATCACCAAAACCTAAAGAAGAGAAACCAACAACACCATCACCAAAACCCAAAGAAGAGAAACCAACAACACCATCACCAAAACCTGAAGAAGAGAAACCAACAACACCATCACCAAAACCTAAAGAAGAGAAACCAACACCAAAGCCACAGCCTACTACTCCTCCAACACCAAAGCCTCAACCCACCCCTCCTCCAACACCAAAGCCTCAACCTTCCCCTCCTCCAACTCCAAAGCCTCAACCTTCTCCTCCTCCAACTCCAAAGCCATCACCTAGCCCTACCCCTACCCCTTCTGCTCCCAATCCTCCTGCACCAAAGCCACAAGAACCAAAACCTTCTCCTCCACCACCCAAACCAACCCCATCTCCCGCCACTCCTCCACCAGAGGATGATTCTCACAAGGAATCACCCAAACAACGACAAAGGCCTGTCCAGTCTCCATCACCACCTGTTCAATCTCCTCCACCTCCACCAATAGTACAATCTCCTCCTCCACCTGTTCACTCACCACCTCCTCCAGTTCAGTCTCCACCACCACCAATGGTACAATCTCCTCCTCCACTGGTTCCTCACCACCTCCTCCAGTTCAGTCTCCACCACCACCTATCCAATCTCCACCCCCACCAATCCATTCTCCTCCCCCACCTGTCCATTCTCCACCACCACCACCTGTCTATTCACCACCTCCTCCTACTTATTCCCCACCACCACCAGTTCTCTCTGCACCGCCTCCTGAAGAAGACATCGTTCTTCCCCCTCACTTTGGCTCTTCTTATGCTTCACCCCCTCCGCCTATCATCGCAGGCTACTAAAACCAGTGCACATCTTGCATCATAA 2058 0.4538 MAFGFVLLLTLFLLSSSTSHALSSAEASFIARRQLLHLHENNDLPDNYADNYKTYLTFPNPRLKGAYIALEAWKKAIYSDPSNFTENWVGAKVCSYNGVFCEKALDDPKIDVVAGIDLNHADIAGYIPPEFGLLTDLALLHINSNRFCGVLPNSFSKLKLLFELDISNNRFVGRFPEPVLSIPNLTFLDLRFNDFEGELPSELFNKSLDAIFLNNNRFISTIPQNFGSSPASVVVFANNHFTGCVPSSIGNMTNLNELVLINNDLTGCLPADIGNLEQVSVFDISKNNFVGVLPKTFNGLKNVEVLSIEHNKLTGFVPRNVCSLSKLVNFTFSNNYFNGEEEGCVVPPKKDVVFDDENNCIPNRPKQKTANDCNVVISKPMDCSKAQCGKGNPSTSSKPPTEKPTTPSPKPKEEKPTTPSPKPKEEKPTTPSPKPEEEKPTTPSPKPKEEKPTPKPQPTTPPTPKPQPTPPPTPKPQPSPPPTPKPQPSPPPTPKPSPSPTPTPSAPNPPAPKPQEPKPSPPPPKPTPSPATPPPEDDSHKESPKQRQRPVQSPSPPVQSPPPPPIVQSPPPPVHSPPPPVQSPPPPMVQSPPPLVPHHLLQFSLHHHLSNLHPHQSILLPHLSILHHHHLSIHHLLLLIPHHHQFSLHRLLKKTSFFPLTLALLMLHPLRLSSQATKTSAHLAS 685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g00948 685 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 9 511 - -
Pste2g00948 685 SUPERFAMILY L domain-like 74 361 - -
Pste2g00948 685 MobiDBLite consensus disorder prediction 407 453 - -
Pste2g00948 685 Gene3D Ribonuclease Inhibitor 233 367 IPR032675 -
Pste2g00948 685 Pfam Leucine rich repeat 279 336 IPR001611 GO:0005515
Pste2g00948 685 MobiDBLite consensus disorder prediction 550 593 - -
Pste2g00948 685 FunFam Leucine-rich repeat extensin-like protein 1 67 225 - -
Pste2g00948 685 FunFam Leucine-rich repeat receptor protein kinase EMS1 226 316 - -
Pste2g00948 685 MobiDBLite consensus disorder prediction 383 593 - -
Pste2g00948 685 MobiDBLite consensus disorder prediction 454 534 - -
Pste2g00948 685 Gene3D Ribonuclease Inhibitor 67 232 IPR032675 -
Pste2g00948 685 PRINTS Proline rich extensin signature 435 452 - -
Pste2g00948 685 PRINTS Proline rich extensin signature 417 433 - -
Pste2g00948 685 PRINTS Proline rich extensin signature 395 416 - -
Pste2g00948 685 PRINTS Proline rich extensin signature 453 478 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g00948 Pste-Chr2 10093192 10095249 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g00948 3 516 Trihelix Transcription Factor Family AT3G19020 52.973 2.49e-176 525