Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g00940 TTTGACCCTGGCCAGAATCATAATGGATCAGTCTTTTAACACTAGAACGTTTCTAAATAATGCATCAGCTAAGTGGTTTATAGAGAAAGAGAATCCTATATGTGTAATGCAACTGGGTAGCATAGCAAGTAGTCAAGTACTAACTAGTCTCTCTAACCAGTGGCAGTTAACAAATCCAGCAATATCTCATGGATCCATTTTGCTTCATCTTTTTCCAAAGTGCACCCTTTGCTCCAACAACACCAAGATCGGGTTGGTAGGCTCCCAGGTCAATCCTTTAACATCAGTTTTGCACACTACAGTGGATACATCACAGTCAATGAAAAATCTGGGAGAACACTCTTCTACTGGGCCTGGATGTTCCTCCATTGCTTATGGACAGTCAGAGGAAATTGGCCCTTTTCATATAAAGCCAGATGGCAAGACCCTTTACCTCAATCCCTACTCTTGGAACCGAGTTGCAAACATTCTTTTTCTTGACACTCCTGTTGGGGTTGGATTTTCATATTCAAAGAACAAATCTGAGATACTGAACAATGGAGATAAGAGGACAGCTGAGGACAATTTAGCATTTCTATTGAAGTGGTTTGAGCGTTACCCCCGATACAAAAGAAGTGACTTTTTTATCAGTGGTGAGAGCTATGCAGGACATTACGTTCCTCAGCTTAGCCAAGTTATTGTAAAGTACAACTCGGCTGCTAAAGAAAATGCTATAAATCTGAAAGGTTTCATGGTAGGAAATGCTCTAACAGATGATTTGCACGACCAATTGGGAATGTTTGAGTTTATGTGGGCAAGTGGTTTGATTTCGGATGAAACATACAAGCTTGTGAACCAACTATGTGATTTTCAGCCAGTTATTCACCCGTCAGACTCATGTGAAAAAATATTGGAAAATGCTTATAATGAAATTGGAGATGTAGACCTATACAGTCTCTATACACCTGTGTGCCATGCTAATGTTAGCCAGTTAAATCTTCTGGTGAAAAGAAAGCATAGAATTGGTAGACTCGATGCAGTGTATGATCCATGCACTGAAAAACACTCCGTTGTATACTTCAATAGACCTGAGGTCCAAACAACTCTTCATGTTGATCCAGATCATAAGCCTGCTACATGGGAGACCTGTAGTGGTAACACAGATGTGGTAATACCTGTGACATCCACTCGCTATAGCATAAATGCTCTCAAGCTTCCTAATGTGAGTCCTTGGCGTGCATGGTATGTTGATGGCGAGGTAGGGGGGTGGACCCAAGAATATGCTGGCCTTACGTTTGTGGCTGTAAGGGGTGCAGGGCATGAAGTTCCTTTGCATAAACCAAAACTTGCTCTAACATTGTGCAAATCCTTCTTAGCAGGAACATCAATGCCTAACCTTGAAATAGTCAGTGCCTCCTGAAATTTCTGTTTACTGTTACCATGGAACCTTTCTTGGTAATATTCTCTCTTGAAATAAAAGGTTGACAGACATACTCAGTTTATGATTGGAGGGCCATATCATGTTGTCAAAACTTTCTCTTAAATACATTCTCTGTTGATCTTGTTTAAATAAGTTCTGTATTAAATGAATGTACTTGATAATATTCGATTTTGATTTCTTTCTTACGTCCCATAATTGTGTGCTGTGCTTAATTTAATAATCTTTTCAGTCTTTTTCATAAGACTCAAATTAGAAGTTAAATTTGATTTTTTTA 1694 0.392 MDQSFNTRTFLNNASAKWFIEKENPICVMQLGSIASSQVLTSLSNQWQLTNPAISHGSILLHLFPKCTLCSNNTKIGLVGSQVNPLTSVLHTTVDTSQSMKNLGEHSSTGPGCSSIAYGQSEEIGPFHIKPDGKTLYLNPYSWNRVANILFLDTPVGVGFSYSKNKSEILNNGDKRTAEDNLAFLLKWFERYPRYKRSDFFISGESYAGHYVPQLSQVIVKYNSAAKENAINLKGFMVGNALTDDLHDQLGMFEFMWASGLISDETYKLVNQLCDFQPVIHPSDSCEKILENAYNEIGDVDLYSLYTPVCHANVSQLNLLVKRKHRIGRLDAVYDPCTEKHSVVYFNRPEVQTTLHVDPDHKPATWETCSGNTDVVIPVTSTRYSINALKLPNVSPWRAWYVDGEVGGWTQEYAGLTFVAVRGAGHEVPLHKPKLALTLCKSFLAGTSMPNLEIVSAS 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g00940 458 PRINTS Carboxypeptidase C serine protease (S10) family signature 152 162 IPR001563 GO:0004185|GO:0006508
Pste2g00940 458 PRINTS Carboxypeptidase C serine protease (S10) family signature 416 429 IPR001563 GO:0004185|GO:0006508
Pste2g00940 458 PRINTS Carboxypeptidase C serine protease (S10) family signature 188 213 IPR001563 GO:0004185|GO:0006508
Pste2g00940 458 PRINTS Carboxypeptidase C serine protease (S10) family signature 139 151 IPR001563 GO:0004185|GO:0006508
Pste2g00940 458 SUPERFAMILY alpha/beta-Hydrolases 110 449 IPR029058 -
Pste2g00940 458 Gene3D - 337 371 - -
Pste2g00940 458 FunFam Carboxypeptidase 364 446 - -
Pste2g00940 458 ProSitePatterns Serine carboxypeptidases, serine active site. 202 209 IPR018202 GO:0004185
Pste2g00940 458 ProSitePatterns Serine carboxypeptidases, histidine active site. 416 433 IPR033124 GO:0004185
Pste2g00940 458 Gene3D alpha/beta hydrolase 85 312 IPR029058 -
Pste2g00940 458 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 107 433 IPR001563 GO:0004185|GO:0006508
Pste2g00940 458 Gene3D - 372 449 - -
Pste2g00940 458 Pfam Serine carboxypeptidase 110 370 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g00940 Pste-Chr2 10070238 10077408 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g00940 370 449 Calmodulin-binding Proteins AT2G22960 27.160 2.78e-08 52.0