Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g00939 TGGCCACTTCTGCAACTGGTATCCAGATCAATACAATCCCCCATGTGTACTACTTCGCACACAGTAATGCCAACTTTTGCACCCTTGCCAGAGCCAGACCTCTCCTTAAACATAAGCCCTCCTTTCACTTTAGATTCTGACACCAAACAAGTGGGAACAAGCTGCAACGGCTTAACATTAACCACCAAAACGCTTTACAACGATATTTGCTCAACCTCGGATTCTGCTAGCACCGCAAGCGATTTAAGCCACGAAAATAGTTTTTGTCACATGGACACTGTCCACACCCTAGGTCGTCATGAACAGACATTAAGTCTAGGCTTTGAAACAGCAATTTTGAGTCCTTATCCTGTCCTAGGAGCACACTCCAGAAACTTCAGTCACCTCCACAACTACCAACCTTTCTCCAATACCCTCGATTTCAAACGAAACGCTAGAGTCATCCATGGTGTGAAAAGAAGCGTCAGGGCCCCTAGAATGCGATGGACTACAACCCTCCATGCTCATTTTGTTCATGCAGTGCAACTTCTTGGTGGTCATGAAAGGGCAACTCCGAAGTCTGTGTTAGAGTTAATGAATGTTAAGGATCTAACTCTAGCTCACGTGAAGAGTCACTTGCAGATGTATAGAACAGTGAAGAGCTCTGACAAAAGCAGCGCAGGATATGGGCAGAGAGCTATAGGCTTGACGCAAAATCCAGGGATTGTCGATCTGCACGGAGTCCTTGCTTGTGAGAGAGCCAATTTGTCACAGCCGCTGTTAATATCCCAAAGGAGGACGGCATGGCAATCATCGATAGAGACAACTTCAGTAAATTACATACAGAACCCCATAGTCAATTCGATGTGTTCTCATTTCAAAGGAAACCGAACCATGGTGGGTGGACAGCATTATGAAGACCTGTCGAATTGCATGAAGGAGAAATTGGATTGTTGCTCTTTGTCACGTTCCGATATGATGATTGACCTAGAATTTACCCTTGGAAGGCCCACTAGCTAGTTGCAAACCGACCACGCGGAACCAAGAGAATTAAATTCACTCTTCTCTAGTGTTGAATGTATTGAAACCCTTTCCTTTGTCACTTAATTAAGTACTGCTCCAACATTATATGGAGGAAAAAATCAGGAACTATATGTTCGTATGAATGATATTTTATGCATGATATATA 1168 0.4375 WPLLQLVSRSIQSPMCTTSHTVMPTFAPLPEPDLSLNISPPFTLDSDTKQVGTSCNGLTLTTKTLYNDICSTSDSASTASDLSHENSFCHMDTVHTLGRHEQTLSLGFETAILSPYPVLGAHSRNFSHLHNYQPFSNTLDFKRNARVIHGVKRSVRAPRMRWTTTLHAHFVHAVQLLGGHERATPKSVLELMNVKDLTLAHVKSHLQMYRTVKSSDKSSAGYGQRAIGLTQNPGIVDLHGVLACERANLSQPLLISQRRTAWQSSIETTSVNYIQNPIVNSMCSHFKGNRTMVGGQHYEDLSNCMKEKLDCCSLSRSDMMIDLEFTLGRPTS 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g00939 332 FunFam Myb family transcription factor 156 214 - -
Pste2g00939 332 Gene3D - 157 214 - -
Pste2g00939 332 Pfam Myb-like DNA-binding domain 159 210 IPR001005 -
Pste2g00939 332 NCBIfam myb-like DNA-binding domain, SHAQKYF class 158 211 IPR006447 GO:0003677
Pste2g00939 332 SUPERFAMILY Homeodomain-like 155 212 IPR009057 -
Pste2g00939 332 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 32 331 IPR044847 GO:0000976|GO:0006355|GO:0010158
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g00939 Pste-Chr2 10054295 10060502 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g00939 126 224 G2-like Transcription Factor Family AT5G42630 72.115 4.08e-45 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Pste2g00939 Myb_DNA-binding 1.4e-05 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g00939 2 10054295 10060502 Pste2g00939 2 10054295 10060502 ECH
Pste8g01120 8 5834729 5839525 Pste2g00939 2 10054295 10060502 PCT