Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g00936 CCAAACAAAACAGCCTTTGCAATAGAAAATGATACTGACCACTTAGCATTACTCAAGTTCAAGGAATCCATTTCTGGTGATCCATATGAAATCTTGCATTCTTGGAATAGTTCTAGTCACTTTTGTAAGTGGCATGGAATCACATGCAATCTCATGCATCAAAGAGTCACAAAATTGGATTTGGAAGGATACATGTTAAAGGGATTCATATCTCCTTATGTAGGCAATCTCTCTTATATGAGAAAACTCTTTATTGACGATAACAACTTCTATGAAAACATCCCACAAGAGTTAGGAAGGTTGTTGCAACTTCGACTCCTCTCTGTTGCAAATAACTCATTTACAGGAGAAATTCCTACCAACTTGACAGGTTGTACTAATCTCAAGCTCTTATACTTCTATGGGAACAATTTCATTGGTAAAATACCAATTGAAATTGGTTCACTTCGAAAGCTTCAACGTTTGAATGTTGCAAAAAATAAGTTAATAGGAGAAATCCCACCATTTATAGGAAATTTTTCTGCCTTGCTTACACTCACACTGGCTTTTAATAACTTAGTGGGAGATATAAATCTATCTGTTAACAAATTGACTGGAACATTTCCATCTTGTCTTTATAATATCTCATCTCTTAGTGTAATCTCAGCTACCACAAATCAATTTCATGGCTCTCTTCCATCTAACTTGTTCAACACCCTCCCTAATCTACAACAATTTTATATTGCTGACAATAAAATCTTTGGTCCAATCCCATCTTCCATCACAAATGCATCTATCCTTTCATTACTTGAGATTAGTAGAAGCCAATTCATCGGACAAGTTCCACCTCTAGGGAAGTTACAACATCTTTATTACCTAGGCTTGTCTTGGAACAATCTAGGTGATAATTCTACTAATGACTTGGAGTTTTTAAAATCATTGATTAATTGTAGTAGGTTGCAAATGTTAGATATATCCAACAATAATTTTGGAGGTGATTTGCCAAATTCATTGGGCAACTTATCCACCCAACTCAATGAACTTTATCTTGGTGGTAATCAGATATCTGGAAAAATTCCAACAGCAATAGGAAATCTAATTGGTTTAACTACATTGATGATGGGATATAATCAGATTGATGGGATTATTCCATCAACTTTTGGACAGTTTCAAAAGATGCAAAAGTTAGTCTTAACTTTGAACAAGTTATCAGGAGATATAGGAACCTTCATAGGTAACCTTACTCAATTTTTTTTTAGATATGGAGGAAACATGTTAGAAGGAAATATACCTTCAAGTATAGGAAAGTGCCAAATGTTACTACATTTAGGCCTTTCACGAAACAAGCTTACAAGAGTCATATCTTTAGAGGTTTTTAACCTTTCTTCTTTGTCAAACTTCTTGTCTTTGTCAGAAAACTCATTGAGTGGTACTATACCAAACGAAGTGGGCAACCTAAAACACATTGATTCCCTAGATCTGTCTGACAATCATCTATCTGGTCACATTCCTGGAACCGTTGGAGAATGCATAATGTTGAAGTACGTCTTTTTGCAAGGAAATTATTTACAAGGAAGCATACCAACCTCTTTGGCATCACTCATAAATCTTCAATATTTGGATCTATCTCAAAACCGTTTGTCTGGATCAATTCCTAGTGTTATGCAGAACATTTCTTTCTTAAAATATTTCAATGTATCCTTTAACATGTTGGATGGTGAGGTGCCAACTCAAGGCGTTTTCCAAAATGCAAGTCAATTTGTGATGACTGGAAATAGTCACCTTTGTGGAGGGATTTCTGAACTACATTTACCCTCATGCCCTATCAAAGGTAAGAAACTTGGAAAACACCATAAGGTCGTGTTGATAGCAGTGATAGTTAGTGTGTTTGCTTTTCTTCTCATATTGTCAATTATTCTAACTATCTACTGGATGAGTAAAAAGAGTAAGAAATCCTCGTTGGATTCACCAACAATTGACCATTTGGCTAAAGTTTCATATCAGAGCCTACACAATGGAACTAATGGGTTTTCAACAACAAACTTGGTAGGCTCTGGACATTTTAGCTCTGTCTATAAAGGAACTCTAAACTTAGAAGACAAAATTGTTGCTATAAAGGTCCTAAACATTCAAAAGAAAGGAGCACACAAGACTTTCATTGCTGAGTCCAATGCACTTAAAAATATTAAACACCGCAATCTTGTTCAAATTTTAACATGTTGTTCAAGCACAAATTACAAAGGTGAAGAATTTAAAGCTTTATACATGAAAAATGGAAGCTTAGAGAAATGGTTGCATCCAATGACACTAACTCCAGAGCATCCAAGAACATTGAATCTTGATCAAAGATTAAATATTATGATTGACATTGCTGCTGCAATACATTATCTTCATCATGAATGTCATCAATCAATTATTCATTGTGATTTAAAGCCAAGCAATGTACTTCTTGATGATAACATGATTGCTCATGTGAGTGATTTTGGCATAGCAAGACTTATCTCAACTATTAATGGTATCACTTATGAGCAAACAAGTACAATTGGAATAAAGGGGACGGTTGGATATGCTCCTCCAGAGTATGGAATGGGTTCTAAGGTGTCTATGAATGGAGACATGCATAGCTTCGGGATTCTTATGTTGGAAATGTTAACTGGAAGAAGACCTACTGATGATATCTTTGAAGATGGTCAAAATTTGCATAACTTTGTAGAAAAGTTAATTCCTGATAATCTTTTATACATTTTGGATCCATCACTTTTACCAGAATATGAAGAAGCTACAATAAGGGAAGAAAATACTAAGAATATAACTCAAACTACTGAGAGGTGCTTAGTTTCACTCTTTATGATAGAACTTGCATGCTCAATGGAATCACCCAAAGAAAGAATGAATATGGTGGATGTCACTAAAGAGTTGTGGAAAATAAAATCATCATTTCTTGCTGGTAAGATAAATGAA 2940 0.3476 PNKTAFAIENDTDHLALLKFKESISGDPYEILHSWNSSSHFCKWHGITCNLMHQRVTKLDLEGYMLKGFISPYVGNLSYMRKLFIDDNNFYENIPQELGRLLQLRLLSVANNSFTGEIPTNLTGCTNLKLLYFYGNNFIGKIPIEIGSLRKLQRLNVAKNKLIGEIPPFIGNFSALLTLTLAFNNLVGDINLSVNKLTGTFPSCLYNISSLSVISATTNQFHGSLPSNLFNTLPNLQQFYIADNKIFGPIPSSITNASILSLLEISRSQFIGQVPPLGKLQHLYYLGLSWNNLGDNSTNDLEFLKSLINCSRLQMLDISNNNFGGDLPNSLGNLSTQLNELYLGGNQISGKIPTAIGNLIGLTTLMMGYNQIDGIIPSTFGQFQKMQKLVLTLNKLSGDIGTFIGNLTQFFFRYGGNMLEGNIPSSIGKCQMLLHLGLSRNKLTRVISLEVFNLSSLSNFLSLSENSLSGTIPNEVGNLKHIDSLDLSDNHLSGHIPGTVGECIMLKYVFLQGNYLQGSIPTSLASLINLQYLDLSQNRLSGSIPSVMQNISFLKYFNVSFNMLDGEVPTQGVFQNASQFVMTGNSHLCGGISELHLPSCPIKGKKLGKHHKVVLIAVIVSVFAFLLILSIILTIYWMSKKSKKSSLDSPTIDHLAKVSYQSLHNGTNGFSTTNLVGSGHFSSVYKGTLNLEDKIVAIKVLNIQKKGAHKTFIAESNALKNIKHRNLVQILTCCSSTNYKGEEFKALYMKNGSLEKWLHPMTLTPEHPRTLNLDQRLNIMIDIAAAIHYLHHECHQSIIHCDLKPSNVLLDDNMIAHVSDFGIARLISTINGITYEQTSTIGIKGTVGYAPPEYGMGSKVSMNGDMHSFGILMLEMLTGRRPTDDIFEDGQNLHNFVEKLIPDNLLYILDPSLLPEYEEATIREENTKNITQTTERCLVSLFMIELACSMESPKERMNMVDVTKELWKIKSSFLAGKINE 980
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g00936 980 SUPERFAMILY L domain-like 11 293 - -
Pste2g00936 980 FunFam Leucine-rich repeat receptor-like protein kinase 10 168 - -
Pste2g00936 980 SUPERFAMILY Protein kinase-like (PK-like) 644 969 IPR011009 -
Pste2g00936 980 Gene3D Ribonuclease Inhibitor 413 606 IPR032675 -
Pste2g00936 980 Gene3D Ribonuclease Inhibitor 191 412 IPR032675 -
Pste2g00936 980 Gene3D Ribonuclease Inhibitor 126 190 IPR032675 -
Pste2g00936 980 SMART LRR_typ_2 527 550 IPR003591 -
Pste2g00936 980 SMART LRR_typ_2 479 503 IPR003591 -
Pste2g00936 980 SMART LRR_typ_2 149 173 IPR003591 -
Pste2g00936 980 SMART LRR_typ_2 359 382 IPR003591 -
Pste2g00936 980 SMART LRR_typ_2 101 125 IPR003591 -
Pste2g00936 980 FunFam LRR receptor-like serine/threonine-protein kinase EFR 640 750 - -
Pste2g00936 980 Pfam Leucine Rich Repeat 312 334 IPR001611 GO:0005515
Pste2g00936 980 Pfam Leucine rich repeat N-terminal domain 11 50 IPR013210 -
Pste2g00936 980 SMART serkin_6 670 973 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste2g00936 980 Pfam Leucine rich repeat 337 396 IPR001611 GO:0005515
Pste2g00936 980 Pfam Leucine rich repeat 506 564 IPR001611 GO:0005515
Pste2g00936 980 FunFam LRR receptor-like serine/threonine-protein kinase EFR 299 606 - -
Pste2g00936 980 ProSiteProfiles Protein kinase domain profile. 670 974 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste2g00936 980 Gene3D Phosphorylase Kinase; domain 1 633 741 - -
Pste2g00936 980 Gene3D Transferase(Phosphotransferase) domain 1 749 976 - -
Pste2g00936 980 PANTHER OS04G0122200 PROTEIN 89 190 - -
Pste2g00936 980 ProSitePatterns Serine/Threonine protein kinases active-site signature. 798 810 IPR008271 GO:0004672|GO:0006468
Pste2g00936 980 Pfam Protein kinase domain 672 898 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste2g00936 980 SUPERFAMILY L domain-like 338 590 - -
Pste2g00936 980 Pfam Leucine Rich repeat 280 295 IPR001611 GO:0005515
Pste2g00936 980 ProSiteProfiles Leucine-rich repeat profile. 529 551 IPR001611 GO:0005515
Pste2g00936 980 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 749 978 - -
Pste2g00936 980 Gene3D Ribonuclease Inhibitor 12 125 IPR032675 -
Pste2g00936 980 ProSitePatterns Protein kinases ATP-binding region signature. 676 699 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g00936 Pste-Chr2 9999319 10002391 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g00936 10 973 Receptor kinase-like Gene Family AT3G47570 42.540 0.0 759
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Pste2g00936 Pkinase 5.5e-37 CL0016