Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g00932 AAGATTTTGGAGTATATCCAAACCTGAACTACATGGACTTCAACTATAACAGAGGCGCCTGCAAAAACATGCAATCACTTAAAATGGTTGGGAATGTAGTAAGTGGCAACATTCCAGGTGAGGTTTTTCAATTGGATCAATTTTCACTTTTAGAACAAATTCTTGCTAATCTTGGGAAGCTTTCAAATTTAATAAGCTTGGATATCTCTCACAACAATTTGTTTGGCCCTACCCATGACTCCCTTAGCAAAATGTTTAGTTTGTCATCCATCAATCTCTCCTACAATAAGTTAGAGGGCCCAGTTCCTGAAAGTGGCATATTCAACTCTTCTTATCCCTTGAATTTGAGCAACAACAAAGATCTTAGTGGGCATATTTGGGGCTTAAGAAAAAATGTAGAGCTCCAAGACAAAAAAATCATTCCAACGTTGAATCCATTTTCAATTTGGTACTTTAATGGGAAAGTTGTAGACATAATCAGAGCAACCAAGGACTTTGACAACCAAAAGAGCATTGGGAAAAATTTATACATTATAACAAGTATTTGCTATAAAAAGTTGAAGTGTGATTCAGACAACTTAGACATTAAGAGGGTGCACACATTTTTAGTTTATGAGTATATGGATAAAGGAAATGTAGCTAACATGTTGAGAGATGACAAGTTTACATTAGAACTGGATTGGCCTAAAAGGGTTGATATTATCAAAGCAAGAATCTATGTGTATCATGATTGTGCTCGACCATTAATTCATAAAGACATATCAAGCAAGAATGTTGTACTATCCTCCAATCTAGAAGCTCATCTTGCTTACACAATGGCAGTGAGAAATGTGATGTGTTTAGCTTTGGCGTTTTGGCTTTTGAGTTTTGAGGGAAAGCACCCTGGTGACCTTATTTCCTCCATATTAGCTAATAGAGAACAGACAATCTCGTCTCCTTCCAAGTACCATGTTGAATTGGATTTGATTGCCAATATGGTTCTTTCATGTTTAAAGAGAAAGCCGCAATCTTTACCAACTATGCGGAAATATAGCTCAGCTCCTTCAACA 1049 0.3642 MDFNYNRGACKNMQSLKMVGNVVSGNIPGEVFQLDQFSLLEQILANLGKLSNLISLDISHNNLFGPTHDSLSKMFSLSSINLSYNKLEGPVPESGIFNSSYPLNLSNNKDLSGHIWGLRKNVELQDKKIIPTLNPFSIWYFNGKVVDIIRATKDFDNQKSIGKNLYIITSICYKKLKCDSDNLDIKRVHTFLVYEYMDKGNVANMLRDDKFTLELDWPKRVDIIKARIYVYHDCARPLIHKDISSKNVVLSSNLEAHLAYTMAVRNVMCLALAFWLLSFEGKHPGDLISSILANREQTISSPSKYHVELDLIANMVLSCLKRKPQSLPTMRKYSSAPST 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g00932 339 Gene3D Transferase(Phosphotransferase) domain 1 164 261 - -
Pste2g00932 339 PANTHER LEUCINE RICH REPEAT KINASE 2 9 166 - -
Pste2g00932 339 SUPERFAMILY L domain-like 9 117 - -
Pste2g00932 339 ProSitePatterns Tyrosine protein kinases specific active-site signature. 238 250 IPR008266 GO:0004672|GO:0006468
Pste2g00932 339 Gene3D Ribonuclease Inhibitor 2 127 IPR032675 -
Pste2g00932 339 SUPERFAMILY Protein kinase-like (PK-like) 189 259 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g00932 Pste-Chr2 9966448 9968924 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g00932 27 259 Receptor kinase-like Gene Family AT4G08850 27.628 1.20e-24 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pste2g00932 None None None