Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g00915 ATGGAGATTTTCAAATGTTTCTACTGCATTAGTCTTCTTGTTACCTTCACGGTATCAGCAGTTCTAGCAATTGATCCTTACTCAGAGGCACTTCTCAGCCTAAAATCTGAACTTTTAGATGATGATAACAGCTTGCACAACTGGGTGGTGCCCTCTGGAGGAAAATTAAGTGGAAAATCTTATGCATGTTCTTGGTCAGGTATCAAGTGCAACAATGACTCAACAGTTTTAACTTCCATAGACCTTTCTATGATGAAACTGGCAGGTGTATTGTCAGGGAAGCAATTTAGCATCTTCACAAACCTTACTAATCTCAACCTCAGCCACAATTTCTTCTCTGGGCAGCTTCCAGCAGAGATTTTCAACCTCACTAGCCTAACAAGCTTGGACATCAGCAGAAACAACTTTTCTGGTCCCTTCCCAGGTGGAATTCCCAGACTCCAAAATTTGGTTGTACTTGATGCCTTTAGCAACAGCTTTTCAGGGACATTGCCTGCTGAATTTTCACAGCTAGCATACCTTAAGGCTCTCAATCTAGCTGGGAGCTACTTCAAAGGGTTAATTCCATCTGATTATGGTTCTTTCAAAAGCCTTGAGTTTCTTCATCTTGCAGGAAATTCCCTCACTGGAAGTATACCTCCAGAACTGGGTCAACTCAACACAGTGACCCACATGGAGATAGGCTACAACCTATACCATGGTTTTATTCCACCTGAATTAGGTAACATGAGTCAACTTCAGTATCTTGACATAGCAGGAGCAAATCTATCTGGCCCTATACCAAAGCAACTATCCAACCTCGCCAGTTTGCAATCACTTTTCCTGTTCAGAAACCAGCTCACAGGATCAATACCAAGCGAGCTCAGCAACATAGAAGCTCTCACTGATTTAGATCTCTCTGATAACTTCCTCACAGGGTCCATTCCTCAAAGCTTCTCAAAGCTAACTAACCTAAGATTGCTCAGTCTCATGTACAATGACATGAGTGGCACTGTTCCTGAAAGCATTGCACAACTACCATCCTTGGAGACTCTTCTCATTTGGAACAACCGCTTCTCTGGCTCACTTCCACAGAGCTTAGGGAGAAACTCCAAACTCAAGTGGGTGGATGCTTCCACAAACAGTTTAGTTGGCAGCATACCACCAGTCATTTGTGTGAGTGGAGCACTATTTAAGCTAATCCTGTTTTCAAACAAATTCACAGGTGGTCTCTCATCAATCTCCAATTGTTCTTCCCTCGTTCGCCTTCGCCTAGAAGATAATTCATTCGCAGGAGAAATCACTTTGAAATTCAGCTATCTTCCTGATATCTTATATGTTGATCTGTCGAGGAACAACTTTGTTGGTGGGATTCCCTTAGATATTTCTCAAGCCTCTCAAATGGAGTATTTCAATGTCTCTTATAATCTGCAATTAGGAGGTATCATCCCTCAACAAACGTGGTCTTTGCCTCAACTTCAAAATTTTTCAGCATCTTCTTGTGGTATTTCTGGTGGTCTTCCCTCATTTGAGTCGTGCAAATCAATTTCAGTTATTGATCTAGCTAGCAATAACTTATCTGGGACCATTCCAAACAGTGTTTCCAAATGCCAAGCTCTTGAGAATATCAAACTATCCAACAATATTTTGACAGGTCATATACCTGACGAGCTTGCCACTATTCCTGTTATTGGTGTAGTGGACCTATCAAACAACAAGCTCAATGGCCCCATACCAGCCAAGTTTGGTAGTTCTTCAAGTTTACAACTTCTCAATGTGTCTTTCAACCATATCTCTGGTTCAATACCCACAGGAAAGTCATTCAAATTGATGGGAAGTAGTGCATTTGTTGGAAATTCAGAGCTATGTGGAGCACCCCTAAGGCCATGTCCTGATTCAGTTGGAATATTTGGAAGCAAAGGCACGTGGAAGGTTACACATATTGTGCTACTTTCTGTAGGGTTGATAATAGTCCTTCTGGGACTTGCTTTTGGAATATTTTATTTGAGAAGGGGAATTAAAAGTCAATGGAAGATGGTCTCATTCGTTGGTCTCCCTCAATTCACAGCAAATGATGTTTTGACAAGCCTCAGTGCCACAAAAGCCACTGAAATCTCATCACCAGCAGTAGTTACAAAGGCTGTTCTGCCCACAGGAATAACTGTTTTGGTCAAGAAGATTGAATGGGAAGCAAGGAGCATGAAGGTTATGTCAGAATTTATAATGAGACTGGGAAATGCAAGACACAAGAATTTAATCAGATTATTGGGGTTTTGCCACAACCAGCAACTAGTCTATCTTTTGTATGATTACTTGCCCAATGGGAATTTGGCTGAGAAAATGGAAATGAAATGGGATTGGGCAGCAAAATTTAGAACAGTGGTTGGAATTGCAAGAGGACTTTGCTTCCTTCACCATGAATGTTACCCAGCTATACCTCATGGAGATTTGAAGTTAAGCAACATTGTATTTGATGAAAATATGGAACCCCATTTGGCAGAATTTGGGTTCAAACAAATGTTGAGGTGGTGCAAAGGCTCATCACCCACCACAACTAAGTGGGAAACAGAATACGATGAAGTCACCAAAGAGGAGCTATGCATGGATATCTACAAATTTGGGGATATGATTCTAGAAATTTTAACTGGTGGAAGGTTGAAAAATGCAGCAGCTAGCATACACAGCAAACCAAGGGAGGTTCTCTTAAGAGAAATTTGCAATGAGAATGAAGCAAGTTCTGTAAGTTCATTGCAAGAGATTAAACTGGTTCTTGAGGTTGCTATGCTTTGCACCAGGACCAGGTCATCCGATCGGTCATCCATGGAAGATGTTCTTAAGCTTCTGTCAGGGCTAAAGCATTTAGATGATGGCAGAACTTCAAAAGAAGGGCAATAA 2874 0.4134 MEIFKCFYCISLLVTFTVSAVLAIDPYSEALLSLKSELLDDDNSLHNWVVPSGGKLSGKSYACSWSGIKCNNDSTVLTSIDLSMMKLAGVLSGKQFSIFTNLTNLNLSHNFFSGQLPAEIFNLTSLTSLDISRNNFSGPFPGGIPRLQNLVVLDAFSNSFSGTLPAEFSQLAYLKALNLAGSYFKGLIPSDYGSFKSLEFLHLAGNSLTGSIPPELGQLNTVTHMEIGYNLYHGFIPPELGNMSQLQYLDIAGANLSGPIPKQLSNLASLQSLFLFRNQLTGSIPSELSNIEALTDLDLSDNFLTGSIPQSFSKLTNLRLLSLMYNDMSGTVPESIAQLPSLETLLIWNNRFSGSLPQSLGRNSKLKWVDASTNSLVGSIPPVICVSGALFKLILFSNKFTGGLSSISNCSSLVRLRLEDNSFAGEITLKFSYLPDILYVDLSRNNFVGGIPLDISQASQMEYFNVSYNLQLGGIIPQQTWSLPQLQNFSASSCGISGGLPSFESCKSISVIDLASNNLSGTIPNSVSKCQALENIKLSNNILTGHIPDELATIPVIGVVDLSNNKLNGPIPAKFGSSSSLQLLNVSFNHISGSIPTGKSFKLMGSSAFVGNSELCGAPLRPCPDSVGIFGSKGTWKVTHIVLLSVGLIIVLLGLAFGIFYLRRGIKSQWKMVSFVGLPQFTANDVLTSLSATKATEISSPAVVTKAVLPTGITVLVKKIEWEARSMKVMSEFIMRLGNARHKNLIRLLGFCHNQQLVYLLYDYLPNGNLAEKMEMKWDWAAKFRTVVGIARGLCFLHHECYPAIPHGDLKLSNIVFDENMEPHLAEFGFKQMLRWCKGSSPTTTKWETEYDEVTKEELCMDIYKFGDMILEILTGGRLKNAAASIHSKPREVLLREICNENEASSVSSLQEIKLVLEVAMLCTRTRSSDRSSMEDVLKLLSGLKHLDDGRTSKEGQ 957
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g00915 957 PANTHER UNNAMED PRODUCT 165 878 - -
Pste2g00915 957 FunFam Leucine-rich repeat receptor-like protein kinase TDR 189 293 - -
Pste2g00915 957 Gene3D Ribonuclease Inhibitor 505 623 IPR032675 -
Pste2g00915 957 SUPERFAMILY L domain-like 310 621 - -
Pste2g00915 957 ProSitePatterns Serine/Threonine protein kinases active-site signature. 805 817 IPR008271 GO:0004672|GO:0006468
Pste2g00915 957 SMART serkin_6 700 941 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste2g00915 957 FunFam Leucine-rich repeat receptor-like protein kinase TDR 681 764 - -
Pste2g00915 957 Gene3D Ribonuclease Inhibitor 223 469 IPR032675 -
Pste2g00915 957 SUPERFAMILY RNI-like 79 401 - -
Pste2g00915 957 Gene3D Transferase(Phosphotransferase) domain 1 763 955 - -
Pste2g00915 957 SUPERFAMILY Protein kinase-like (PK-like) 702 941 IPR011009 -
Pste2g00915 957 FunFam Leucine-rich repeat receptor-like protein kinase 27 188 - -
Pste2g00915 957 Pfam Leucine rich repeat 293 352 IPR001611 GO:0005515
Pste2g00915 957 Pfam Protein tyrosine and serine/threonine kinase 711 940 IPR001245 GO:0004672|GO:0006468
Pste2g00915 957 Gene3D Phosphorylase Kinase; domain 1 691 762 - -
Pste2g00915 957 Pfam Leucine rich repeat N-terminal domain 29 71 IPR013210 -
Pste2g00915 957 Gene3D Ribonuclease Inhibitor 148 222 IPR032675 -
Pste2g00915 957 Gene3D Ribonuclease Inhibitor 26 147 IPR032675 -
Pste2g00915 957 SMART LRR_typ_2 195 219 IPR003591 -
Pste2g00915 957 SMART LRR_typ_2 267 290 IPR003591 -
Pste2g00915 957 SMART LRR_typ_2 291 314 IPR003591 -
Pste2g00915 957 SMART LRR_typ_2 99 123 IPR003591 -
Pste2g00915 957 SMART LRR_typ_2 339 363 IPR003591 -
Pste2g00915 957 FunFam Leucine-rich repeat receptor-like protein kinase TDR 312 625 - -
Pste2g00915 957 ProSiteProfiles Protein kinase domain profile. 670 944 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste2g00915 957 FunFam Leucine-rich repeat receptor-like protein kinase TDR 765 949 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g00915 Pste-Chr2 9859842 9863039 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g00915 7 942 Receptor kinase-like Gene Family AT5G51350 54.171 0.0 943
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pste2g00915 PK_Tyr_Ser-Thr 1.5e-16 CL0016