Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g00909 GAAAATATTCCCGTTGAAGAGGTCTTTGAGCAGCTAAAATGTTCCAAAGAGGGTTTAACATCCACAGAAGGAGAGAAAAGACTCCAAATTTTTGGCCCCAACAAATTAGAAGAGAAAACAGAAAACAAGTTACTTAAGTTTTTGGGTTTTATGTGGAATCCATTATCATGGGTTATGGAGTGTGCAGCTATCATGGCCATTGTCTTGGCCAATGGAGGGGGCAAGCCACCGGATTGGCAAGATTTCACTGGTATTGTGGTGTTGCTTATCATCAACTCAACAATCAGTTTCATTGAGGAAAACAATGCAGGCAATGCTGCAGCTGCTTTGATGGCTGGTGAAATTGAGGCTGTTGTCATTGCCACTGGTGTCCACACCTTCTTTGGTAAGGCTGCACACCTTGTTGACAGCACCAACAATGTTGGCCACTTCCAAAAGATCATTGAACTTTGTGACCTCAAGGGAGAGGCATTGAAAAAGGCTCATAGGGTTATTGATGAGTTTGCTGACCGTGGTCTACGTTCTTTGGGTGTTGCTCGCCAGACTGTTTCTGAAAAGACCAAGGAGAGTGAAGGAGAAGCATGGGAATTCTTGGGTCTCCTACCCCTCTTTGACCCTCCAAGGCATGATAGTGCTGAGACCATTCGTCGTGCTATTGAACTTGGAGTCAATGTTAAAATGATCACTGGTGACCAACTTGCCATTGGCAAAGAAACTGGTCGTAGACTTGGAATGGGCACCAACATGTACCCTTCATCCTCCCTCGTTGGTGATTCCAAGGATGTTGCCCTTGCAACAATGTCAGTTGATGAACTCATTGAGAAGGCTGATGGATTTGCTGGAGTCTTCCCTGAACACAAATATGAGATTGTGAAGAGGTTGCAGGATAGGAAGCACATTGTTGGAATGACTGGAGATGGTGTCAATGATGCACCAGCACTGAAGAAGGCAGACATTGGCATTGCAGTCGATGATGCAACTGATGCAGCAAGGAGTGCATCTGACATTGTCTTGACCCAGCCAGGACTCAGTGTGATTGTGAGTGCTGTGTTGACAAGCAGGGCCATCTTCCAGAGGATGAAGAACTACACAATCTATGCTGTTTCCATCACAATTCGTATTGTGTTTGGCTTCTTGCTTGTTGCTCTTATCTGGAAATTCGACTTCTCTCCCTTCATGGTTCTCGTCATTGCCATCTTGAACGATGGAACCATCATGACGATCTCAAAGGACAGGGTGAAGCCATCTCCTTTACCTGACTCATGGAAGCTTAAGGAAATTTTTGCCACTGGAGTTGTTCTTGGAGCATACATGGCCATCATGAGTGCAGTCTTCTTCTTTGCCATTCATGACACTAATTTCTTCACTAGCATTTTTGGGGTCAGCTCAATTGTAGAAAGTGAGGAGCAACTCAACTCTGCTCTTTACCTTCAAGTGAGTATCATTAGTCAGGCCCTCATTTTTGTGACTAGGTCAAGGGGCTGGTCATACTTTGAGTGCCCTGGCACAATGCTCTGTGTTGCCTTCCTCTGTGCACAGATGGCAGTGCCTGGGACAACACGCTCCAAACCAAGACTGCATTCACAACCAAGAAGGACTATGGTAAGGGAGAAAAAGAAGCCCCATGAGCATGAAACCCTCATGAACAACAGTTATGAGCAATCTGAAATTGCTGAGCAGGCCAAGAGACGTGCTGAGGCAGCTAGGCTGAAAGACCTACACACCCTTAAGGGACATGTTGAATCAGTTGTGAAGTTGAAGGGTCGTGACATTGATACCATCCAACAACACTACACTGTATAA 1803 0.4548 ENIPVEEVFEQLKCSKEGLTSTEGEKRLQIFGPNKLEEKTENKLLKFLGFMWNPLSWVMECAAIMAIVLANGGGKPPDWQDFTGIVVLLIINSTISFIEENNAGNAAAALMAGEIEAVVIATGVHTFFGKAAHLVDSTNNVGHFQKIIELCDLKGEALKKAHRVIDEFADRGLRSLGVARQTVSEKTKESEGEAWEFLGLLPLFDPPRHDSAETIRRAIELGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLVGDSKDVALATMSVDELIEKADGFAGVFPEHKYEIVKRLQDRKHIVGMTGDGVNDAPALKKADIGIAVDDATDAARSASDIVLTQPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVFGFLLVALIWKFDFSPFMVLVIAILNDGTIMTISKDRVKPSPLPDSWKLKEIFATGVVLGAYMAIMSAVFFFAIHDTNFFTSIFGVSSIVESEEQLNSALYLQVSIISQALIFVTRSRGWSYFECPGTMLCVAFLCAQMAVPGTTRSKPRLHSQPRRTMVREKKKPHEHETLMNNSYEQSEIAEQAKRRAEAARLKDLHTLKGHVESVVKLKGRDIDTIQQHYTV 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g00909 600 Gene3D - 50 116 - -
Pste2g00909 600 Gene3D - 342 516 - -
Pste2g00909 600 MobiDBLite consensus disorder prediction 520 551 - -
Pste2g00909 600 Pfam haloacid dehalogenase-like hydrolase 173 318 - -
Pste2g00909 600 Gene3D - 205 341 IPR023214 -
Pste2g00909 600 PANTHER CALCIUM-TRANSPORTING ATPASE 147 515 - -
Pste2g00909 600 PRINTS H+-transporting ATPase (proton pump) signature 476 497 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pste2g00909 600 PRINTS H+-transporting ATPase (proton pump) signature 161 179 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pste2g00909 600 PRINTS H+-transporting ATPase (proton pump) signature 304 320 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pste2g00909 600 PRINTS H+-transporting ATPase (proton pump) signature 276 292 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pste2g00909 600 PRINTS H+-transporting ATPase (proton pump) signature 335 360 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pste2g00909 600 Gene3D - 142 204 IPR023299 GO:0000166
Pste2g00909 600 NCBIfam HAD-IC family P-type ATPase 278 391 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pste2g00909 600 PRINTS P-type cation-transporting ATPase superfamily signature 221 231 - -
Pste2g00909 600 PRINTS P-type cation-transporting ATPase superfamily signature 327 339 - -
Pste2g00909 600 PRINTS P-type cation-transporting ATPase superfamily signature 199 210 - -
Pste2g00909 600 PRINTS P-type cation-transporting ATPase superfamily signature 304 323 - -
Pste2g00909 600 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 144 210 IPR023299 GO:0000166
Pste2g00909 600 SUPERFAMILY HAD-like 196 350 IPR036412 -
Pste2g00909 600 Pfam Cation transporter/ATPase, N-terminus 3 65 IPR004014 -
Pste2g00909 600 FunFam Plasma membrane ATPase 197 352 - -
Pste2g00909 600 Gene3D - 550 600 - -
Pste2g00909 600 SMART Cation_ATPase_N_a_2 1 71 IPR004014 -
Pste2g00909 600 SUPERFAMILY Calcium ATPase, transmembrane domain M 2 514 IPR023298 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g00909 Pste-Chr2 9749296 9759768 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g00909 541 600 Primary Pumps ATPases AT3G42640 75.000 6.57e-20 92.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g00909 2 9749296 9759768 Pste2g00909 2 9749296 9759768 ECH