Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g00894 TTTTCTTTTGCTGTTGTCTTTGTTGTACTTCTTCTGTACCAAGAGCTTCAATTTATAAAAGCACAATCATGGATACGAGCTGGTTACTGGTATTCTGGCACGGGGTTTCCCGTTTCAGACATAAACTCTTCTCTCTTCACACACCTCATATGTGCTTTTGCTGAGATGATGAAAAATCCTTCTCTTCATTCACAAACACTGTTAAGAAAAGAACCTTTCCATCTCCACCCTTCTTTCCATTGGGGCAGCGCTGCTAATTCCACTGTCTTCAAATTAATGGCAAGCAATGTTTCTTCGAGAAAACCCTTCATTGAGTCTTCAATAAGAATAGCCAGACTCTACGGATTTGAAGGCCTGGACCTGGCTTGGGTTTCTGCTAACACAAGTTCTGAAATGAGCAACATGGGGAACCTTTTTGAAGAGTGGAGAAAGAGTGCAAAATCCGAGGTTGCAGAAAACTCAAGTTCGTCAGAGTTAATCTTAACTGCATCTGTTAAATTCAGGCCTAGCATGGATTTCACATCATACCCAGTTGAGTCAATAAGAAGTAACTTGAATTGGGTACATGTTTTGCCTTATGACAACACCACGTTTCCCAGGAGAAACTCCACTGCTTCTCATGCAGCCTTGTTTGATCCTTCAAGTACGGTGAACATAGATGATGGAATCAAAGAATGGATCGGTAGTGGAATAGCAGCTAACAAGGTTGTTTTGGGGTTGCCTTTTTATGGATATGCATGGACTCTGAAGAACCCTAATGACAGTGCATCAATTACATTCACTGGTCCTGCGATTACGAGTGGTGGAGATATGAGTTATAAGGATATCAAGGCTTATATTAAACGAAATGGGGCTAGTGTGAAGTATAATTCTACTTATGAAGTCAATTACTGCACCGTTGGATCAACGTGGATAGGTTTTGATGATGTTCAGGTTGTTACAATTAAGGTGGCTTATGCAAGGGAAAAGAACCTGCTTGGCTATGCTGTGTGGCAAGTTGCTGATGATGACAATTGGGTTCTTTCTGCAGCAGCAGCAGGAAAGTTTAATTATATATACAGAGATTCCTGGCCTAGTCGGGACAGAGACACTTCAGAGCTTTTTCAAGGCAATGCTCCAGATTTACAAGTCTTAAGCTTTGATGATATTGAGCTGGCCACAGGAAGATTTTCAATTGAAAACAAGCTTGGAGAAGGTGGCTATGGTCCTGTATTCAAGGGCATCTTACCAGATGGTCAAGAAATAGCTGTGAAAAGGTTATCAAAAGCATCCTCACAAGGCTTTGAGGAATTTAAGAATGAGGTTACACTAACTGCAAGACTCCAACATGTGAATCTTGTTCGGCTATTGGGTTTCTTCATTGATGAAAAAGAGCAAATGTTGATCTACGAGTACCTACCAAACAAAAGCTTGGACTTTTACTTATTTGATCCTATTAGATGCCACCTTTTGGATTGGAAAAAACGAATAGACATAATTGAAGGAATTACTCAAGGACTTCTTTATCTACAAGAGTATTCTAGATTGACAATAATCCATAGAGACATAAAAGCTAGTAATATTTTGCTAGATGATGAGATGAAACCAAAAATTGCAGACTTCGGAATGGCAAGAATATTTAGTAAAGACGAATTTGAAGTAAACACCAGAAGAATCGTTGGAACTGGTTATGTTTCTCCTGAATACGCTAGAAATGGCTTTTATTCTACTAAGTCGGATGTGTATAGCTTTGGAGTTCTACTTCTACAAATTATAAGTGGTAAGAGAATGGCATGCTTATATGGTGAACATGAAAACTTAATCCTCACAGAATATGCCTATGAGCTTTGGAATGAAGGGAAAGGCATGGAGTTTGCAGATCCTTTTCTGAATGACACCAATTATGTGGGTAAAATATTAAGGTGCATTCAAATAGCTTTACTATGTGTGCAAGAAGATGCTAACGATAGGCCATCTGTGATGGAAATCTCTTCAATGCTGAAAAAAGATACTGCTCTTGCAATCCCTAAAAGACCAGCATTTTCAAGAAATCAAGTTGTGCAGAATTCAAATGGACATACTATGCAGCATGAAAGATGGTCTATCAATGAGGCAACAATCTCTGAAGTTCATGGTAGA 2118 0.3914 FSFAVVFVVLLLYQELQFIKAQSWIRAGYWYSGTGFPVSDINSSLFTHLICAFAEMMKNPSLHSQTLLRKEPFHLHPSFHWGSAANSTVFKLMASNVSSRKPFIESSIRIARLYGFEGLDLAWVSANTSSEMSNMGNLFEEWRKSAKSEVAENSSSSELILTASVKFRPSMDFTSYPVESIRSNLNWVHVLPYDNTTFPRRNSTASHAALFDPSSTVNIDDGIKEWIGSGIAANKVVLGLPFYGYAWTLKNPNDSASITFTGPAITSGGDMSYKDIKAYIKRNGASVKYNSTYEVNYCTVGSTWIGFDDVQVVTIKVAYAREKNLLGYAVWQVADDDNWVLSAAAAGKFNYIYRDSWPSRDRDTSELFQGNAPDLQVLSFDDIELATGRFSIENKLGEGGYGPVFKGILPDGQEIAVKRLSKASSQGFEEFKNEVTLTARLQHVNLVRLLGFFIDEKEQMLIYEYLPNKSLDFYLFDPIRCHLLDWKKRIDIIEGITQGLLYLQEYSRLTIIHRDIKASNILLDDEMKPKIADFGMARIFSKDEFEVNTRRIVGTGYVSPEYARNGFYSTKSDVYSFGVLLLQIISGKRMACLYGEHENLILTEYAYELWNEGKGMEFADPFLNDTNYVGKILRCIQIALLCVQEDANDRPSVMEISSMLKKDTALAIPKRPAFSRNQVVQNSNGHTMQHERWSINEATISEVHGR 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g00894 706 Pfam Glycosyl hydrolases family 18 28 336 IPR001223 GO:0005975
Pste2g00894 706 ProSiteProfiles Glycosyl hydrolases family 18 (GH18) domain profile. 24 352 IPR001223 GO:0005975
Pste2g00894 706 SMART serkin_6 390 666 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste2g00894 706 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 357 703 - -
Pste2g00894 706 FunFam Chitotriosidase-1 242 307 - -
Pste2g00894 706 ProSiteProfiles Protein kinase domain profile. 390 666 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste2g00894 706 SUPERFAMILY Protein kinase-like (PK-like) 375 672 IPR011009 -
Pste2g00894 706 Gene3D - 242 307 IPR029070 -
Pste2g00894 706 Gene3D Transferase(Phosphotransferase) domain 1 466 672 - -
Pste2g00894 706 Pfam Protein kinase domain 391 657 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste2g00894 706 SUPERFAMILY (Trans)glycosidases 24 347 IPR017853 -
Pste2g00894 706 FunFam Uncharacterized protein 367 465 - -
Pste2g00894 706 Gene3D Glycosidases 38 338 - -
Pste2g00894 706 ProSitePatterns Serine/Threonine protein kinases active-site signature. 511 523 IPR008271 GO:0004672|GO:0006468
Pste2g00894 706 Gene3D Phosphorylase Kinase; domain 1 355 465 - -
Pste2g00894 706 SMART 2g34 24 336 IPR011583 GO:0008061
Pste2g00894 706 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 466 668 - -
Pste2g00894 706 SUPERFAMILY Chitinase insertion domain 243 307 IPR029070 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g00894 Pste-Chr2 9614101 9619883 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g00894 378 706 Receptor kinase-like Gene Family AT4G11530 52.819 8.72e-109 343
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pste2g00894 Glyco_hydro_18 5.6e-53 CL0058