Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g00889 ATGGTCTCCAGAATTGCAATTTCCCTTGTTCTTTTTCATGTTCTTTTCTGCCAAGAGTTTGAACCTTTAGATGCACAAACTTGGGTACAAGCTGGTTATTGGTATTCTGGGAGTGGATTTCCTGTGTCAAACATTAACTCTGCTCTTTATACTCACCTCATATGCGCTTTTGCTGAATTGAACTCTTCCACATATGAGCTCTTTATTTCCCCATCTGATGAGCAATACTTCTCTTCATTCACAAGCACTATCAAACAAAAGAATCCATCCATCACTACACTGCTGTCCATTGCAGGTGGAAATGGTAACTACACTGTCTTATCATCAATGGTAAGCAAAGCCCCTTCAAGGAAAACATTCATTCAGTCTTCTATAAAAAGAGCCAGGTTTTATGGGTTTCAAGGCCTGGACCTGTCATGGGTTTCTGCCAACACAAGTTCAGATATGAGCAACATGGGAAGGCTTTTTGAAGAGTGGAGAGAAGCTGCAAAATCTGAGGCAACAAACTCTAGTACTCAAGAGTTGATCTTAACTGCAGCTGTTCAGTTTAGACCAGGTTTGGATTTCACAACTTATCCGGTGGAGTCTATCAGAATTAACTTGAATTGGGTTCATGTTATGGCTTATGACTACTACATGCCTCAGTGGGCAAACTTTACTGCTGCTCATGCAGCCTTGTATGATCCTTCAAGTTCTGTGAACACAGATAATGGTATCAAGCAATGGATTGGTAGTGGAATAACAGCTAGCAAGTTTGTTTTGGGGTTGCCTTTCTATGGATATGCTTGGAATCTTAGGAATCCCAAGGACAATGTAATAGGTGCTTCAGCAACGGGTCCAGCTATTACAGAAGGTGGAGATATGAGCTATAAGGACATCAAAGCTTATATTCAACGTTATGGGGTCAGCGTTATGTACAATGCTACTTATGTAGTCAATTACTTTTCCATTGGATCAAATTGGGTAGGTTATGATGATGTTGAGGTTGTCAAAGTGAAGGTGTCTTATGCCAGGGAAAATAAGTTACTTGGGTATGTTGTGTGGCAAGTTCCTTATGATGACAATTGGGCACTTTCTAGCGCAGCAGCTGAACTTGTTGACCAAAATGGACACCATAGCCGGCGTTTATTAGTGATCATTTTGATCACAGCTACTATCTCTGTACTCCTACTTGGCATCTCCGTATACTACTTAAGGAGTAGATTCTTCAAATCAACAGGAGCGATCAATACATCTAAAGACTCTTGGTCTAATGTGAATAAGAATAAAGAGGCTTCAAGACTTTTCCACGGCAATGCTCCAGATTTACAAGTCTTCTGCCTTTCTGATATTGAGCTGGCCACAGATAGATTTTCAATTGAAAATAAGCTTGGTGAGGGTGGCTATGGTCCTGTTTACAAGGGCATCCTACCAGATGGTCTAGAAATAGCTGTGAAAAAACTATCAAAAGCCTCTAGACAAGGATTTGAAGAATTCAAAAATGAGGTGATGCTGACTGCAAGACTGCAACATGTGAATCTTGTTCGGCTATTGGGTTTCTACATTGGTGGAGAAGAACAGATTTTAATCTATGAGTACATGCCAAACAAAAGCTTGGACTTCTATCTATTTGATCCTATCAGACGTTACCTTTTGGATTGGAGAAAACGCATAGACATCATTGAGGGAATTACTCAGGGACTTCTTTATCTACAAGAATATTCTAGATTGACCATAATCCATAGAGACATAAAAGCTAGCAATATTTTGTTAGACAAAGACATGAAACCAAAAATCTCAGACTTTGGCATGGCAAGAACATTTGGGAAAGATGAACTTGAAGCAAACACTAGCAGAATTGTAGGAACTTATGGTTATGTTTCCCCTGAATATGCAATGAAAGGTTTGTACTCGACCAAATCCGATGTGTACAGTTTCGGAGTTCTACTTCTACAAATTGTAAGTGGCAGGAGGACAGCATGCATGTATGGTGAATATGAAAACTTAAACCTCATGGAGAATGCTTATGAGCTTTGGAAAGAAGGAAAAGGCATGGAGTTTGCAGATCCTTCACTTGATGACACAAATTTAACTTGTAAATTATTGAGGTGCATGCAAATAGCTTTACTATGTGTGCAGCAAGATGCAAATGATAGGCCTTCTGTGAAGGAAATTTCTTCAATGTTGAAAAGTGAGACTATTCTGAAAATCCCCCAAAGGCCAGCATTTTCAACAATTAAAGATAAGCTGAAACCAAATGAATTTATTATGCAGGAAGAAAAGTTGTCGGTTAATGATGCAACAATCTCTGAAGTTGTAGCTCGATAG 2307 0.3936 MVSRIAISLVLFHVLFCQEFEPLDAQTWVQAGYWYSGSGFPVSNINSALYTHLICAFAELNSSTYELFISPSDEQYFSSFTSTIKQKNPSITTLLSIAGGNGNYTVLSSMVSKAPSRKTFIQSSIKRARFYGFQGLDLSWVSANTSSDMSNMGRLFEEWREAAKSEATNSSTQELILTAAVQFRPGLDFTTYPVESIRINLNWVHVMAYDYYMPQWANFTAAHAALYDPSSSVNTDNGIKQWIGSGITASKFVLGLPFYGYAWNLRNPKDNVIGASATGPAITEGGDMSYKDIKAYIQRYGVSVMYNATYVVNYFSIGSNWVGYDDVEVVKVKVSYARENKLLGYVVWQVPYDDNWALSSAAAELVDQNGHHSRRLLVIILITATISVLLLGISVYYLRSRFFKSTGAINTSKDSWSNVNKNKEASRLFHGNAPDLQVFCLSDIELATDRFSIENKLGEGGYGPVYKGILPDGLEIAVKKLSKASRQGFEEFKNEVMLTARLQHVNLVRLLGFYIGGEEQILIYEYMPNKSLDFYLFDPIRRYLLDWRKRIDIIEGITQGLLYLQEYSRLTIIHRDIKASNILLDKDMKPKISDFGMARTFGKDELEANTSRIVGTYGYVSPEYAMKGLYSTKSDVYSFGVLLLQIVSGRRTACMYGEYENLNLMENAYELWKEGKGMEFADPSLDDTNLTCKLLRCMQIALLCVQQDANDRPSVKEISSMLKSETILKIPQRPAFSTIKDKLKPNEFIMQEEKLSVNDATISEVVAR 768
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g00889 768 CDD GH18_plant_chitinase_class_V 26 359 - -
Pste2g00889 768 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 103 763 - -
Pste2g00889 768 SMART 2g34 28 353 IPR011583 GO:0008061
Pste2g00889 768 SUPERFAMILY Protein kinase-like (PK-like) 435 730 IPR011009 -
Pste2g00889 768 Pfam Glycosyl hydrolases family 18 32 353 IPR001223 GO:0005975
Pste2g00889 768 Gene3D - 258 324 IPR029070 -
Pste2g00889 768 Gene3D Phosphorylase Kinase; domain 1 410 526 - -
Pste2g00889 768 FunFam Chitotriosidase-1 258 324 - -
Pste2g00889 768 Pfam Protein tyrosine and serine/threonine kinase 452 722 IPR001245 GO:0004672|GO:0006468
Pste2g00889 768 FunFam Uncharacterized protein 428 526 - -
Pste2g00889 768 SUPERFAMILY Chitinase insertion domain 259 324 IPR029070 -
Pste2g00889 768 ProSitePatterns Serine/Threonine protein kinases active-site signature. 572 584 IPR008271 GO:0004672|GO:0006468
Pste2g00889 768 SUPERFAMILY (Trans)glycosidases 31 356 IPR017853 -
Pste2g00889 768 ProSiteProfiles Protein kinase domain profile. 451 728 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste2g00889 768 FunFam Uncharacterized protein 527 731 - -
Pste2g00889 768 CDD STKc_IRAK 457 723 - -
Pste2g00889 768 SMART serkin_6 451 727 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste2g00889 768 Gene3D Glycosidases 42 355 - -
Pste2g00889 768 ProSiteProfiles Glycosyl hydrolases family 18 (GH18) domain profile. 28 369 IPR001223 GO:0005975
Pste2g00889 768 Gene3D Transferase(Phosphotransferase) domain 1 527 735 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g00889 Pste-Chr2 9555885 9560660 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g00889 439 768 Receptor kinase-like Gene Family AT4G11530 52.819 2.20e-115 362
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pste2g00889 Glyco_hydro_18 6.4e-65 CL0058