Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g00878 ATGAGCAGCGAGTTCTACCGATTCGCAGTTTCATCCCACTTCAGCAGTTTCCCCAAATCCTTCTCCCTCCGCAAGAAAGTCCCCTGGTGGTACCAAATCCTCGACCCTCGCTCGCGCTTTGTCGCGAAATGGAACCGCACGTTTCTCTATGTCTGCATTGTCGCGTTGTTCTTAGACCCACTTTACTTCTATTTCCCCATCACAGGGGACAAGGCATGCATGCAGACCGACATAATCCTCGGAGTCTTCGTCACCTTCTCTCGCACCGTCGCCGACCTCTTCTTCCTCTTCCACATGGTCCTCAAGTTCCGCACCGCTTATGTTTCTCCCAATACTCGCGTTTATGGCCGCAAAGATCTCGTAACCGAACCTCGCAAGATTGCTTCGCGCTATCTCAAGTCTGATTTCTTTATTGATCTTCTCGCCACCCTTCCCCTCCCTCAGATAGTGATCTGGTTTGTGATTCCGGCGGTGAAAAATTCAACGGTGGCTCATGTAAATCACACCCTGTCCTTGATTGTTCTAATTCAGTTTATACCTAGGTTGTTCCAGATTTTTCCTCTGCAACGGAGAATCTTGAAGACAAGTGGGCTTATTGCCAAAACTGCCTTGGCAGGGGCTTTATACAATCTTGGTTCCTACATGCTAGCCAGCCATGTTTTAGGAGCTTCGTGGTACGTGTCATCAATTCAGCGACAGTATGAGTGTTGGAGAATAACATGCAAAAGGGAGATGAACAGAACGCACTCTCCAACTTGTAACCCTTCCTTTCTGGACTGTGCTACCCTCAACCACCATGAAAGGCAAGCTTGGTTCAAACGCAGTAGAGTTCTCAGTAATTGTGATGCCCTCAACAATAAAAATCAGTTCCAGTTCGGAATGTTCGCTGATGCTTTCACTGACCATGTCTCCTCTTCAAGATTCATCCAGAAATACTTTTATTGCCTCTGGTGGGGTTTGAAGAATCTAAGTTCATACGGACAAAATCTTCAGACCAGCACTTACAGTGTTGAAACATTATTTTCAAGTTTCATATGCATCGCAGGTCTAATCCTGTTTGCGCATCTCATTGGTAACATGCAGAATTATCTGCAATCTACAACTGCAAGAGTTGAAGAGTGGAGACTTAAACAGAAAGATACAGAAGAGTGGATGAATCACCGGCAGCTTCCACCTGAACTACAACAACGTGTTCGTCGTTTTGTTCAATATAAATGGCTTGCCACTAGAGGAGTAGACGAAGAAGCCATTTTGCGTTCTTTGCCATTGGATCTTCGGCGGCAGATTCAGAGGCATCTGTGTCTTGACATTGTTCGTCGGGTTCCATTTTTTGGTCAAATGGATGACCAGCTTCTGGATGCAATATGCGAGAGGCTAGTTTCGTCGCTGAACACAAAAGACACATACATAGTGAGGGAAGGGGATCCAGTGAGGGAAATGCTATTCATAATAAGAGGGCAAGTAGAAAGCTCGACAACGGACGGTGGCAGAACGGGGTTCTTCAACTCCATAACCCTCAGGCCCGGCGACTTCTGCGGCGAGGAACTGCTGACATGGGCCCTCATGACCTCTTCAAGTCTGAACCTTCCGTCCTCCACTCGAACAGTGAAAACCATAACCGAAGTGGAAGCCTTTGCACTCCGAGCTGAGGACCTGAAATTCGTGGCGAGCCAGTTCAAACGGCTCCACAGCAAGAAACTGCAGCACGCCTTCAGGTACTATTCGCATCAATGGCGGGCCTGGGGGGCCCACTTTATACAAGCTGCATGGAGACGGCACCGCAAGAGGAAGCTGGCGCTGGAGCTGCTGGAGAAGGAGAATTTGTTGTACACGCATGTGGAGATAGAAGAGGATGATGATGATGAAGAAGGAGGCGCTGCTGAGACTTCTATGGCCAATGTTGTTGGGCATATTCAGAATCTTGGGGCCACTGTTTTGGCTTCCAAATTTGCTGCCAACACTAGGAAAGGGAAGAAGAAGGCTCTTAAAAAGGTTGCTATTAGTCTTCCTGATGCTGGTAGTTTGAAGATGCCCAAGATGTTCAAGCCCACGGAACCTGATTTCTCAACATTTGATGATTAA 2082 0.4755 MSSEFYRFAVSSHFSSFPKSFSLRKKVPWWYQILDPRSRFVAKWNRTFLYVCIVALFLDPLYFYFPITGDKACMQTDIILGVFVTFSRTVADLFFLFHMVLKFRTAYVSPNTRVYGRKDLVTEPRKIASRYLKSDFFIDLLATLPLPQIVIWFVIPAVKNSTVAHVNHTLSLIVLIQFIPRLFQIFPLQRRILKTSGLIAKTALAGALYNLGSYMLASHVLGASWYVSSIQRQYECWRITCKREMNRTHSPTCNPSFLDCATLNHHERQAWFKRSRVLSNCDALNNKNQFQFGMFADAFTDHVSSSRFIQKYFYCLWWGLKNLSSYGQNLQTSTYSVETLFSSFICIAGLILFAHLIGNMQNYLQSTTARVEEWRLKQKDTEEWMNHRQLPPELQQRVRRFVQYKWLATRGVDEEAILRSLPLDLRRQIQRHLCLDIVRRVPFFGQMDDQLLDAICERLVSSLNTKDTYIVREGDPVREMLFIIRGQVESSTTDGGRTGFFNSITLRPGDFCGEELLTWALMTSSSLNLPSSTRTVKTITEVEAFALRAEDLKFVASQFKRLHSKKLQHAFRYYSHQWRAWGAHFIQAAWRRHRKRKLALELLEKENLLYTHVEIEEDDDDEEGGAAETSMANVVGHIQNLGATVLASKFAANTRKGKKKALKKVAISLPDAGSLKMPKMFKPTEPDFSTFDD 693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g00878 693 Gene3D - 46 367 - -
Pste2g00878 693 SUPERFAMILY Voltage-gated potassium channels 35 365 - -
Pste2g00878 693 Pfam Cyclic nucleotide-binding domain 466 554 IPR000595 -
Pste2g00878 693 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 25 688 - -
Pste2g00878 693 MobiDBLite consensus disorder prediction 674 693 - -
Pste2g00878 693 Gene3D Helix hairpin bin 369 434 - -
Pste2g00878 693 Gene3D Jelly Rolls 441 561 IPR014710 -
Pste2g00878 693 SUPERFAMILY cAMP-binding domain-like 372 568 IPR018490 -
Pste2g00878 693 CDD CAP_ED 443 574 IPR000595 -
Pste2g00878 693 ProSiteProfiles cAMP/cGMP binding motif profile. 443 573 IPR000595 -
Pste2g00878 693 FunFam Cyclic nucleotide-gated ion channel 1 441 559 - -
Pste2g00878 693 FunFam Cyclic nucleotide-gated ion channel 1 370 434 - -
Pste2g00878 693 SMART cnmp_10 443 574 IPR000595 -
Pste2g00878 693 Pfam Ion transport protein 44 371 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g00878 Pste-Chr2 9427591 9433005 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g00878 10 688 Ion Channels AT3G48010 64.051 0.0 913