Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g00875 CGAGAGTTAGCAGTTAAAAGACAACTTGGTGCTTTGTGAAGCTCCTCATCACCAAGTACAAGAACCAAGAAACACCCTTTGGAGATATTTCCTTTTGGTCATTGTCCATGGCAGCTAGAAGACTCTCCTGGCTCCTCTCTTGCTCTCTATCTGTTTCCCCTTCTTTTCAATCTGCTTCTTCTCTACTTCACTCACTTGTGTCTATGTTATAGAATGCTGTCTTCAATTCATTTCATAAATTTCCCCATGATTTTTGTTCCCACATGGAGAAACTCTAGCAAGTGGGGAAATATTAACAGATTCAGCACTGCAGCAGCAGTTGAGGAATTAATCACTCCACAAGTTCCAATAACATACACTAAGCATCTGATAAATGGACAATTTGTGGATGCTGCTTCAGGGAAAACTTTTCCAACATATGACCCTCGCACAGGAGAAGTGATTGCTCATGTTGCTGAAGGTGATGCAGAAGATATTAACCGTGCAGTATCAGCAGCTCGCAAGGCCTTTGATGAAGGACCTTGGCCTAAAATGACTGCTTATGAAAGATCTAAGATAATGCTGCGCTTTGCTGATTTGGTTGAGAAACACAGTGATGAACTTGCAGCTCTGGAGACATGGAACAATGGAAAGCCTTATGAACAGTCTGCCACTACTGAATTACCATTATTTGTGCGTTTGTTTCATTACTATGCTGGTTGGGCAGATAAAATTCATGGTATGACAGTGCCTGCTGATGGAAATTATCATGTGGAGACATTGCATGAACCAATAGGTGTTGCAGGGCAAATCATCCCTTGGAACTTTCCTCTTGTAATGTTTGCTTGGAAAATTGGACCAGCTCTTGTAAGTGGAAATACTGTCGTCCTTAAGACAGCTGAACAAACACCTTTAACAGCTCTCTATGTGGCTAAACTTTTTCATGAGCTAGCATTCACTGGATCTACCGATACTGGAAAAGTTGTTCTTGAATTGGCAGCAAGAAGCAATTTGAAGCCAGTGACATTGGAACTTGGTGGGAAATCACCTTTCATAGTGTGTGAGGATGCTGATGTTGACCACGCTGTAGAACAAGCGCACTTTGCCCTGTTTTTTAATCAGGGCCAATGTTGTTGTGCTGGGTCTCGTACCTTTGTACATGAGCGTATCTATGATGAGTTCTTGGAGAAAGCAAAGGCTCGTGCTTTGAACCGTGTTGTTGGGGATCCCTTCAAAAAGGGTGTTGAACAAGGCCCTCAGATTGATGTGGAACAATTTCAGAAAGTCCTTAGGTACATAAAGTCCGGTATTGAAAGCAAGGCCACCCTTGAATGTGGGGGCGACAGAATTGGCTCAAAGGGCTTCTTTGTCCAGCCTACTGTCTTTTCAAATGTTCAGGATGACATGTTGATAGCAAAAGATGAAATCTTTGGCCCTGTACAAACCATCCTGAAGTTCAAGGATATTGATGAAGTCATTAGAAGGGCAAATGCAACGCGTTATGGTCTAGCTGCTGGTGTTTTCACTAAGAATGTGCACACAGCCAACACATTGATGCGAGCACTGAGAGTTGGAACTGTGTGGATTAATTGCTTTGATGTTTTTGATGCTGCAATTCCTTTTGGAGGGTACAAAATGAGCGGCATTGGCAGGGAGAAGGGTATCTACAGTCTCAATAATTACTTGCAAGTCAAAGCTGTGGTTTCGCCAGTGAAGAATCCTGCATGGCTGTGAATTGCTCAAACTGCTATGTTTTTGTCCTCTGCTTTGATTGATAAACATTTCAAGATACTTTTTTAATTGAGTTATGAACGAAATCCTACTTGCCTATCATCATTTTCCACCGAGGCAATTGCATGCATAAATAATGTGGTATCACTCTAAGGTAAACTTGGTTTGGTACCCAACGTTATATCGGCTGGATTTTGATGCTTCTATAATTTATGTATTTTTCCATTGTTAATTGCTCAAACACAACTTGGATTCTGGAATGACACTGTTACTGTAGGATTGAGTATTTGTACCATTCTGTACTGTGTGGATTAGTTTCAAGCTGAACATAAACTAATTCCCATGACTTTGATGGTAATCCCTTCCTGAAAACGAACGAACGGGATGTAAAGTGAAAAGCAGGAATCATAGTCCATGAAATCGGATAAGGATAGGTTAGTTTGATCATTCCATTTGTTGAGATACTAAAGATGCTATGTATAAGTGTGAAG 2201 0.4116 MLSSIHFINFPMIFVPTWRNSSKWGNINRFSTAAAVEELITPQVPITYTKHLINGQFVDAASGKTFPTYDPRTGEVIAHVAEGDAEDINRAVSAARKAFDEGPWPKMTAYERSKIMLRFADLVEKHSDELAALETWNNGKPYEQSATTELPLFVRLFHYYAGWADKIHGMTVPADGNYHVETLHEPIGVAGQIIPWNFPLVMFAWKIGPALVSGNTVVLKTAEQTPLTALYVAKLFHELAFTGSTDTGKVVLELAARSNLKPVTLELGGKSPFIVCEDADVDHAVEQAHFALFFNQGQCCCAGSRTFVHERIYDEFLEKAKARALNRVVGDPFKKGVEQGPQIDVEQFQKVLRYIKSGIESKATLECGGDRIGSKGFFVQPTVFSNVQDDMLIAKDEIFGPVQTILKFKDIDEVIRRANATRYGLAAGVFTKNVHTANTLMRALRVGTVWINCFDVFDAAIPFGGYKMSGIGREKGIYSLNNYLQVKAVVSPVKNPAWL 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g00875 499 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 265 272 IPR029510 GO:0016491
Pste2g00875 499 Pfam Aldehyde dehydrogenase family 239 489 IPR015590 GO:0016491
Pste2g00875 499 Pfam Aldehyde dehydrogenase family 57 238 IPR015590 GO:0016491
Pste2g00875 499 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 269 495 IPR016163 GO:0016620
Pste2g00875 499 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 293 304 IPR016160 GO:0016491
Pste2g00875 499 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 239 489 - -
Pste2g00875 499 FunFam Mitochondrial aldehyde dehydrogenase 2 271 460 - -
Pste2g00875 499 FunFam Aldehyde dehydrogenase, mitochondrial 38 239 - -
Pste2g00875 499 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 34 268 IPR016162 GO:0016491
Pste2g00875 499 SUPERFAMILY ALDH-like 43 492 IPR016161 GO:0016491
Pste2g00875 499 FunFam Aldehyde dehydrogenase, putative 461 487 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g00875 Pste-Chr2 9405843 9418454 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g00875 1 499 Aldehyde Dehydrogenase Gene Family AT3G48000 72.830 0.0 818
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g00875 2 9405843 9418454 Pste2g00875 2 9405843 9418454 ECH
Pste6g02336 6 11352551 11359478 Pste2g00875 2 9405843 9418454 PCT