LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pste2g00872	CCTATAAAATGGAACAATGTGTTCAAAGTTTCATCAACCCTCTCCTACTTTGCTGTTTCACATTGGAAAGAAAAAATGGGAAGGGCGTTGGTGTTTGGGCTATGCTTTCTATTGCTCTCACCATTTCCATTTGCGTTCTCTGAGAAGTGCTTTCCAAAAGAGAAGAAAGCACTTCTGCAACTAAAGAAGGACCTGGGCAACCCTTACATCATAACATCATGGAACCAAAAAGAAGACTGTTGCGAGTGGTATTGCTGCGTCACGTGCGACAAGAGAACCAATCACGTGATAAGCATAGACATATCATCCTCCATTCCAGACGCCAATCTCTCAGGCCCAATACCTCCCTCCATCGGTGACCTTCCTTATTTGGAGTCCATCACTTTCCACAAGCTCCCCAACCTCGTGGGCCTACTCCAGCCCGCCATCGCCAAACTCACCAAACTCAAGTCCCTCTTCATCACCTACACCAATCTCTCAGGCCCTGCTGCCCGGCTTCTTGGGCCAGCTCAAAACCTCGAGCTCATCAAACTTTCCTTTAACAACCTCTCGGGCTCTATTCCCAGCCTCGCTTTACCAACTACCCAATCTCGGCTCCCTGCAGCTAGACCGCAACAAGCTCACGGGCCCCATCCCGGCCTCGTTCGGCCCGGGCCTGATCTCATGCTCTCGCACAACCAACTTTCCGGGCCCATTCCCGCTTCCTTGGGGAACTTAAACCCAGATAATATAGACCTGTCAAGGAACAAGCTTGAAGGTGATGCTTCCATGCTTTTCAGTAGTAAGAAAACCACACAAGTAATTGATCTTTCAAGGAACAAATTGTCCTTTGACATGTCCCATTTGACGTTTCCGAAGAAGAGTCTGATATGGTTGGATCTGAATCACAATAACATTTATGGGAACATTCCTGTGTCGCTTACCAAAGTGGAAAATTTGCAGCACTTCAATGTGAGCTATAATCCTCAGTTAAGTGGTCAGATACCGCAGGGTGGGGAATTGCAAAGATCCCGAACAAGAAGAGCAACGATGTTGCTGAAGTTGGTATTATGGTTTTTATTGGTGTCTGAATTTGCAGTTGCAGTCTCAGAGAGGTGCCACCCAGAAGACAAGAAGGTGCTACTCCAATTCAAGAAGGAACTAAAGAACCCTTATTTCCTAGCATCGTGGAACCCAAACTTTGATTGCTGCACCTGGTACTGTGTCTACTGCGACAAAACAAAGGGCAACCGCATCACCCAACTCTTCCTAAGAAACTCTGTCCCCGACACCAATCTCTCAGGCCCAATACCCCCCTCTGTCGGAGACCTACCTTTCTTAGAGCAACTCACACTCCACAAATTCCCCAAACTCATTGGCCCAATCCAACCCTCCATCGCTAAACTCACCAACCTCACACACCTCGAGATCACCTACACCAACATCTCCGGCGCCCTACCCGATTTCTTAGCCCAGCTCAAAAACCTAAACCTCATCAAACTCTCTTTTAACAACCTCTCCGGCCCTATCCCCGCCTCGCTTTCCCAACTACCCAATCTCGCCTCCCTCCAGCTGGACCGCAACAAGCTCACCGGCCCAATCCCGGCCTCCTTCGGCTCCTTCAAAAAGCCCGGGCCTGATCTCATTCTCTCCCACAACCACCTCTCCGGGCCCATTCCCGCTTCCTTGGGCAACTTAGACCCACAAAGGATAGACTTTTCAAGGAACAAGCTTCAAGGTCATGCTTCCATGCTCTTCGCCTCCAACAAAAGGACGCAGACAGTGGACCTTTCAAGGAACAAATTGTCCTTTGACATGTCCCATTTGATGTTTCCGAAGAAAAGCTTGATATGGTTGGATCTGAATCACAATAACATTTATGGGAACATTCCTGTGTCACTTACCGAAGTGGAGAGTTTGCAGCACTTCAACGTGAGTTACAATAATCGATTAAATGGTGAGATTCCGCAGGGTGGAAGATTGCAAGAGTTTGATATCTATTCTTATTTTCACACTAAGTTGTGTGGCTCCCCACTTCCTCCATGCAAAAAATAAGGTTATGTAAATTTATCTATTTTGAATAAAATAAATTTCTGTGCTGGTTTGGTTAAACAATGTTGTAATGACATTGTTTATAGAACTAAAAGAGAATATGGCTTTATTATAAATTATGAGAGTAAATTATGGTTTTGTTCCATAATAATGGTTTTATTATAGAACTACCGCTTATATTTCAGGTATAGTTAAAGTTATTTTAAGTTGTCTGTGATTTTTTTTTTTTAAAAGTCTCAATTTTTTAAAAAATGTTTACATATTTGCTTTGTTAAAATTACAAAATGGTTTATAAAAGATAATATTTTATTTAGAAAAAATAATATTTTATTAAAATTACAAAATGACTTATAA	2385	0.4373	PIKWNNVFKVSSTLSYFAVSHWKEKMGRALVFGLCFLLLSPFPFAFSEKCFPKEKKALLQLKKDLGNPYIITSWNQKEDCCEWYCCVTCDKRTNHVISIDISSSIPDANLSGPIPPSIGDLPYLESITFHKLPNLVGLLQPAIAKLTKLKSLFITYTNLSGPAARLLGPAQNLELIKLSFNNLSGSIPSLALPTTQSRLPAARPQQAHGPHPGLVRPGPDLMLSHNQLSGPIPASLGNLNPDNIDLSRNKLEGDASMLFSSKKTTQVIDLSRNKLSFDMSHLTFPKKSLIWLDLNHNNIYGNIPVSLTKVENLQHFNVSYNPQLSGQIPQGGELQRSRTRRATMLLKLVLWFLLVSEFAVAVSERCHPEDKKVLLQFKKELKNPYFLASWNPNFDCCTWYCVYCDKTKGNRITQLFLRNSVPDTNLSGPIPPSVGDLPFLEQLTLHKFPKLIGPIQPSIAKLTNLTHLEITYTNISGALPDFLAQLKNLNLIKLSFNNLSGPIPASLSQLPNLASLQLDRNKLTGPIPASFGSFKKPGPDLILSHNHLSGPIPASLGNLDPQRIDFSRNKLQGHASMLFASNKRTQTVDLSRNKLSFDMSHLMFPKKSLIWLDLNHNNIYGNIPVSLTEVESLQHFNVSYNNRLNGEIPQGGRLQEFDIYSYFHTKLCGSPLPPCKK	677

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pste2g00872	677	Pfam	Leucine rich repeat	463	523	IPR001611	GO:0005515
	Pste2g00872	677	SUPERFAMILY	L domain-like	50	335	-	-
	Pste2g00872	677	Pfam	Leucine rich repeat N-terminal domain	53	90	IPR013210	-
	Pste2g00872	677	Pfam	Leucine rich repeat N-terminal domain	368	405	IPR013210	-
	Pste2g00872	677	FunFam	LRR receptor-like serine/threonine-protein kinase GSO1	410	677	-	-
	Pste2g00872	677	SUPERFAMILY	L domain-like	365	669	-	-
	Pste2g00872	677	Gene3D	Ribonuclease Inhibitor	49	346	IPR032675	-
	Pste2g00872	677	Gene3D	Ribonuclease Inhibitor	365	676	IPR032675	-
	Pste2g00872	677	PANTHER	POLYGALACTURONASE INHIBITOR 1	351	676	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pste2g00872	Pste-Chr2	9387913	9395349	Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pste2g00872	107	675	Receptor kinase-like Gene Family	AT5G46330	28.276	3.77e-38	150