Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g00867 GGTCTTTGTAAGATGGCTGGAAGTGGATTGTTTGCTGAAATTATAGATGGAGATGTGTACAAGTACTACTTTGATGGAGAATGGAAGAAATCTAATTCAGGGAAAGTTGTTTCTATCATCAACCCCACTACCAGAAAGACTCAATACAAAGTTCAAGCTTGTTCACAAGAAGAAGTTAACAAAGTAATGGATTCAGCAAAATGTGCACAAAAGTCATGGGCAAAGACCCCACTGTGGAAGAGGGCTGAACTTCTTCACAGGGCAGCTGCTATTCTCAAACAACACAAAGACCAAATTGCAGAGTCTGGGGATCTGGTTTCTTACTGTGCTGAAGAAGGGGTAAGGATTCTGGGAGAGGGAAAATTCTTGGTATCAGATAGCTTTCCTGGAAATGAAAGGACAAAATATTGCCTCACATCCAAGATTCCATTAGGAGTGATTTTAGGCATTCCACCTTTTAACTATCCTGTCAACCTTGCTGTCTCAAAAATTGCTCCTGCACTGATTGCTGGAAACTCGATTCTGCTCAAGCCTCCAACTCAGGGGGCTGTTTCTGCTCTTCACATGGTTCATTGCTTTCACATGGCTGGTTTTCCCAAAGGTGTAATAAATTGTGTCACTGGAAAAGGCTCAGAAATTGGTGACTTCCTCACTATGCATCCAGGAGTGAATTGTATAAGCTTCACTGGTGGAGATACTGGTATTGCAATTTCAAAGAAAGCAGGCATGATTCCTCTGCAAATGGAGTTGGGAGGAAAGGATGCCTGCATTGTACTTGAGGATGCTGACCTGGATTTGGTGGCTGCAAACATAATAAAAGGAGGATTTTCATACAGTGGTCAGAGGTGCACTGCTATTAAGGTTGTCCTAGTGATGGAATTAGTTGCTGATGCATTGGTAGAGAAAGTGAAGGCTAAGGTGGCAAAACTAAGTGTTGGCCCACCAGAAGATAACTGTGATATCACCCCAGTTGTTTCAGAATCATCAGCCAATTTTATTGAAGGCTTGGTCAAGGATGCTAAACAGAAAGGAGCAACATTCTGTCAGGAGTATAGAAGAGAAGGGAATCTCATTTGGCCTTTACTACTGGATAATGTTAGGCCTGATATGAGAATTGCATGGGAAGAGCCATTTGGACCAGTTTTGCCTGTTATTAGGATAAACTCTATTGAAGAAGGGATCCACCATTGTAATGCTAGCAATTTTGGACTTCAGGGTTGTGTCTTCACAAAGGATATCAACAAAGCAATAATGATCAGTGATGCGATGGAGACAGGCACAGTTCAGATAAATTCTGCCCCAGCTCGTGGACCAGATCATTTTCCCTTTCAGGGTATAAAGGACAGTGGAATTGGATCTCAAGGGATTACCAACAGCATAAACATGATGACCAAG 1395 0.4222 GLCKMAGSGLFAEIIDGDVYKYYFDGEWKKSNSGKVVSIINPTTRKTQYKVQACSQEEVNKVMDSAKCAQKSWAKTPLWKRAELLHRAAAILKQHKDQIAESGDLVSYCAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVILGIPPFNYPVNLAVSKIAPALIAGNSILLKPPTQGAVSALHMVHCFHMAGFPKGVINCVTGKGSEIGDFLTMHPGVNCISFTGGDTGIAISKKAGMIPLQMELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAIKVVLVMELVADALVEKVKAKVAKLSVGPPEDNCDITPVVSESSANFIEGLVKDAKQKGATFCQEYRREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSIEEGIHHCNASNFGLQGCVFTKDINKAIMISDAMETGTVQINSAPARGPDHFPFQGIKDSGIGSQGITNSINMMTK 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g00867 465 CDD ALDH_F11_NP-GAPDH 19 465 - -
Pste2g00867 465 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 248 255 IPR029510 GO:0016491
Pste2g00867 465 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 26 464 IPR016162 GO:0016491
Pste2g00867 465 SUPERFAMILY ALDH-like 19 458 IPR016161 GO:0016491
Pste2g00867 465 PANTHER ALDEHYDE DEHYDROGENASE 4 465 - -
Pste2g00867 465 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 252 442 IPR016163 GO:0016620
Pste2g00867 465 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 276 287 IPR016160 GO:0016491
Pste2g00867 465 FunFam NADP-dependent glyceraldehyde-3-phosphate dehydrogenase 252 442 - -
Pste2g00867 465 Pfam Aldehyde dehydrogenase family 28 464 IPR015590 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g00867 Pste-Chr2 9342877 9354423 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g00867 5 465 Aldehyde Dehydrogenase Gene Family AT2G24270 84.583 0.0 852