Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g00865 ATGGAGATTGTGATTTCCTTGACAATCTTGTTTGTGGGTATAGCAATTTTGGTTGTTATCCATTTCTGCATGGTGGGGAGGGCCTTTGGAAGGAACAACAGCAATGGTAACGAAGAAGCTACTCAAGGACAGAGCATGAAGAGAATGTTTTGTAGGGACAACATGGGTAATCTCAAGAACCTTCCTTGCTATGCTTACAAGGATCCAGAAAAAGGTTGCAGCAGCCTCGTGGATTGTGCAATTTGTTTGGAGAATTTCAAGGATGGTGATGTGTGCAGATTGTTGCCAAATTGTGGCCACAGCTACCATGCGAACTGCATAGAATTGTGGATGTTCCACTCACCAAAGTGTCCCGTTTGTAGAACTTGGGTTCATTCACCTGTTGTGTTGAAGGAACAACAAAGTACTGTTTCAGAAAGTGTAGAAATTGTAACTGCATAA 441 0.424 MEIVISLTILFVGIAILVVIHFCMVGRAFGRNNSNGNEEATQGQSMKRMFCRDNMGNLKNLPCYAYKDPEKGCSSLVDCAICLENFKDGDVCRLLPNCGHSYHANCIELWMFHSPKCPVCRTWVHSPVVLKEQQSTVSESVEIVTA 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g00865 146 SMART ring_2 79 120 IPR001841 -
Pste2g00865 146 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 35 127 IPR013083 -
Pste2g00865 146 ProSiteProfiles Zinc finger RING-type profile. 79 121 IPR001841 -
Pste2g00865 146 SUPERFAMILY RING/U-box 57 127 - -
Pste2g00865 146 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE 3 134 - -
Pste2g00865 146 Pfam Ring finger domain 78 121 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g00865 Pste-Chr2 9312214 9312654 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g00865 2 121 C3H Transcription Factor Family AT1G76410 30.645 8.22e-16 68.9