Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g00864 GGGCTACAGAAACAGAAGCCCGCTTTAGGCAGAACCAACCTAACACAATGCTCTTTCCTTCCCACTTCCTCTCTCACTCTGACTCAGTTCCCATTTAAACAAACTTTGTTCTCTTGTATTGTGGGATTATTGTTTGGTGTTGTTCTTGTGACACACCCTTGTCCTTATCACACTAATATTCTTTCACTTTCACAACTATGCAACCCTGTAGTAGAGAAATGCAAGGCCTCAACTCTCTCTTAAACTCTTCCCAAATCTCCCTCCAAGACCTTCACCACCCCACACCCCAGATCCAACAAAATTCCCATTCTCACATGAACCATCACCAACACCAACAACAACAACAAATCCCTCACTTTGATCCCATTTCCCACGACGATTTCTTAGAGCAAATGCTCTCCTCATGCTCTTGGCCAGACCTCTCCCCAAACAAGCCCTTATGGGACTCTAACAATGAAACCGCACCAACAACCGCCGTGTCCGTTGCCGCGGTTTCGTCAAACAACAACAGCGATAATAACAATAACAACATACCGTTTACCTACGACGAGCACTCCACCTTAGCCTCCAAGTTCCGCAACCACCAGATCAGCGCCTCCAACGCCAAAAACGCTCTCATGCTACAGCACCAACTGCTCATGTCCAGAGACTCTTCTTTTCACATGCTGCCCGGAAACGACGTCGTTGATGCCTCCTCCTTCAAACCCCCTACTCCTGTTGGTGAAGCTTCTGTCCAAGCTCTCTACAATGGCTTCCAGGATCTCTTCATGCCACGGCTCTCACCTCAAATCAGACTCAGCATTTTCAACATCCTCAGGGAAGTTCGAATCCGATGCAGGGCAAAATTTTGGAGCCCCGGCGGCGGTGGCGGCGCGGCAAACCAAGCTCCGGCGAGCGGCGGCGGTGCGGCGGCTCAGCCGCGGCAGAGGGTTCGAGCCAGGAGGGGTCAAGCCACGGACCCACACAGCATCGCCGAGAGGTTACGAAGGGAAAGAATCGCAGAGAGAATGAAGGCCCTACAGGAACTGGTTCCTAATGCCAACAAGACAGACAAGGCATCCATGCTAGATGAGATCATTGATTACGTGAAGTTTCTGCAGCTCCAAGTCAAGGTTCTGAGCATGAGCAGATTGGGCGGTGCTGCTGCTGTTGCTCCCCTTGTTGCTGATATGTCTGAGGGAGGTGATTGCATCCAAGCCAATGGCGGCAACAGTAACGGCGGTGGGGCCCACGGCTCGAACTCCAACACCACAACCAACAACCAAACGACAGCGACAACCTCAAACGACACCCTAACGATGACGGAGCACCAGGTTGCGAAACTCATGGAGGAAGACATGGGTTCCGCCATGCAGTATCTTCAAGGCAAGGGCCTTTGCCTCATGCCCATTTCCCTCGCCACCGCAATCTCCACCGCCACGTGTCACACCAGGACCCCCTTGATCCCCTCCGCCCCAACCGCCGCCGCCACCCAGATCCCCTCCGCTGTCAACCCCGCCGCCGACGGCCCCTCGTCCCCCAGCATGTCCGTCCTCACCGTACAGTCTGCCGTCGCCGGCGGTGACCCCGCCGTCAAGGACGCCGCCTCCGTCTCCAAGCCGTAACGGCACCGTTTGCGTAGACAAAGCAGACAAAGAAAAAAAGAAAAAGAAAACGTGAAAGTGTCAAAGGACTGAAAATGACGTGTGTTTTTCAAAAGAGCCGTTAAAGTCTACGAAAATAAGGGGTTGACACGACGACGCCGTATTTACCTAGACTTTGTTTGGCTGACCGCTGATGCTAACTTTCTATTTCATGTTTTTCAACCAATCACAAACACAAACTCCACTCTCTATTACCTACTTCTCCCTCTTCTTTTCTTTTTATTATTATTAATTATCCGAACAAATTACAGAATGCACCAATTTCATGTTTAATGAAATTATATATGCGCA 1934 0.5114 MQPCSREMQGLNSLLNSSQISLQDLHHPTPQIQQNSHSHMNHHQHQQQQQIPHFDPISHDDFLEQMLSSCSWPDLSPNKPLWDSNNETAPTTAVSVAAVSSNNNSDNNNNNIPFTYDEHSTLASKFRNHQISASNAKNALMLQHQLLMSRDSSFHMLPGNDVVDASSFKPPTPVGEASVQALYNGFQDLFMPRLSPQIRLSIFNILREVRIRCRAKFWSPGGGGGAANQAPASGGGAAAQPRQRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAAVAPLVADMSEGGDCIQANGGNSNGGGAHGSNSNTTTNNQTTATTSNDTLTMTEHQVAKLMEEDMGSAMQYLQGKGLCLMPISLATAISTATCHTRTPLIPSAPTAAATQIPSAVNPAADGPSSPSMSVLTVQSAVAGGDPAVKDAASVSKP 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g00864 468 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 249 311 IPR036638 GO:0046983
Pste2g00864 468 MobiDBLite consensus disorder prediction 221 255 - -
Pste2g00864 468 FunFam Transcription factor bHLH66 248 313 - -
Pste2g00864 468 Pfam Helix-loop-helix DNA-binding domain 256 301 IPR011598 GO:0046983
Pste2g00864 468 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 40 404 - -
Pste2g00864 468 MobiDBLite consensus disorder prediction 333 366 - -
Pste2g00864 468 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 251 300 IPR011598 GO:0046983
Pste2g00864 468 Gene3D - 246 308 IPR036638 GO:0046983
Pste2g00864 468 MobiDBLite consensus disorder prediction 29 51 - -
Pste2g00864 468 SMART finulus 257 306 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g00864 Pste-Chr2 9301863 9309132 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g00864 227 467 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G24260 60.687 1.09e-93 282
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pste2g00864 HLH 1.8e-09 No_clan