Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g00860 ATGATGAAGGAAGCCTGTGATGGCTTTGTGAGGGCTGATCAGATTGATCTCAAGAGCATCGATGAGCAGCTCGAGAGGCACCTCAGCAAGGTCCTCATGAAGCAGAGGGACGACGATGATGCTGCTTCTGACCACTCTCGTCACTCTAGCTCCTTTGCCACTTCTACCAAGTTCAAGACTGTGGCCGCTGCCCCTGCTCCTCCTGTGTTCAAGAAACAGAGGCAGGACTGGGAAATTGACCCTTCTAACCTCGTCATCAAGAGCGTCATTGCCAGGGGCACTTTCGGCACTGTCCACCGTGGCATCTATGATGGCGTTGATGTTGCTGGCAAACTCATTTTGTGTCTAAAAATTTATGTTGTTCCAGTTGATGATATTAGTTTTCTAGGGAATGCTGAATTTAAAATGCTGGACTGGGGTGAAGAAGGGCATCGGACAGAGGCTGAAATTGCTGCCCTCAGGTCTGCGTTTACTCAAGAAGTTGCTGTTTGGCATAAACTTGAACATCCTAATGTCACTAAGTTTATTGGGGCAACGATGGGGTCTTCAGAATTACAGATACAGACTGATAATGGTCTAATTGGAATGCCAAGCAATATCTGCTGCGTGGTTGTAGAGTATCTTGCTGGAGGTACGCTGAAATCTTTCCTAATCAAGAATAGGAGGAGGAAGTTAGCTTTTAAGGTTGTCATCCAGCTGGCACTTGATCTTGCAAGAGGGCTGAGTTATCTTCATTCTCAGAAGGTTGTCCACAGAGATGTAAAGACAGAGAACATGCTGTTGGATAAGACACGCACTGTCAAAATTGCTGATTTTGGGGTGGCACGTGTTGAAGCATCAAATCCTAACGATATGACTGGGGAGACTGGTACACTTGGTTACATGGCTCCTGAGGTTTTGAATGGCAACCCGTATAACAGGAAATGTGATGTGTACAGTTTTGGTATCTGTTTGTGGGAAATATATTGTTGTGACATGCCATATCCTGACTTAAGTTTCTCAGAGATTACATCGGCTGTCGTTCGCCAGAATCTGAGGCCAGAAATACCTAGATGTTGCCCAAGTTCACTGGCAAATGTAATGAAGCGATGCTGGGATGCAAATCCTGATAAACGACCAGAAATGGATGAGGTAGTTTCCTTGCTGGAAGCTATCGATACATCCAAAGGTGGAGGTATGATCCCTGTTGATCAGCAGCAGGGTTGTTTTTGCTTCCGTAAGAAAAGAGGACCTTGATCCTTACTCCAACTATCTATGATCATTTTTAGCTATTCAAAGAATTAATGTGTATCTATGGTAAGAAAAAAGGATTTGGATGTCAAGATGAGAGGAATATACAATAGAGGGTATAGGAAGGAGCAGTTGGTGATGTGTCAATTCTTATGTAAATCCATAACTCTTATTTTGTTTTATTCTTACCTTTTTTTGTTTAGGTTTTGTGGGTATGAATACTACTTTCAGCTTGGGCTTCTTGACTATGTTGCCGGACTGGCATTGTAACCTTGTAAGATCTTCATTATACTGTTGTAATCTTGATTGATATGATTAAATTGGATCTATTTACTGGATATCCTCTAATCTGTC 1584 0.4287 MMKEACDGFVRADQIDLKSIDEQLERHLSKVLMKQRDDDDAASDHSRHSSSFATSTKFKTVAAAPAPPVFKKQRQDWEIDPSNLVIKSVIARGTFGTVHRGIYDGVDVAGKLILCLKIYVVPVDDISFLGNAEFKMLDWGEEGHRTEAEIAALRSAFTQEVAVWHKLEHPNVTKFIGATMGSSELQIQTDNGLIGMPSNICCVVVEYLAGGTLKSFLIKNRRRKLAFKVVIQLALDLARGLSYLHSQKVVHRDVKTENMLLDKTRTVKIADFGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEITSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSLLEAIDTSKGGGMIPVDQQQGCFCFRKKRGP 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g00860 411 Pfam Protein tyrosine and serine/threonine kinase 154 382 IPR001245 GO:0004672|GO:0006468
Pste2g00860 411 FunFam Serine/threonine-protein kinase HT1 208 393 - -
Pste2g00860 411 CDD STKc_MAP3K-like 90 382 - -
Pste2g00860 411 Gene3D Phosphorylase Kinase; domain 1 72 191 - -
Pste2g00860 411 Gene3D Transferase(Phosphotransferase) domain 1 209 401 - -
Pste2g00860 411 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 49 385 - -
Pste2g00860 411 ProSiteProfiles Protein kinase domain profile. 84 385 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste2g00860 411 PIRSF ILK 146 391 - -
Pste2g00860 411 PIRSF ILK 29 118 - -
Pste2g00860 411 SMART serkin_6 84 385 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste2g00860 411 ProSitePatterns Serine/Threonine protein kinases active-site signature. 249 261 IPR008271 GO:0004672|GO:0006468
Pste2g00860 411 PRINTS Tyrosine kinase catalytic domain signature 353 375 IPR001245 GO:0004672|GO:0006468
Pste2g00860 411 PRINTS Tyrosine kinase catalytic domain signature 243 261 IPR001245 GO:0004672|GO:0006468
Pste2g00860 411 PRINTS Tyrosine kinase catalytic domain signature 309 331 IPR001245 GO:0004672|GO:0006468
Pste2g00860 411 PRINTS Tyrosine kinase catalytic domain signature 205 218 IPR001245 GO:0004672|GO:0006468
Pste2g00860 411 SUPERFAMILY Protein kinase-like (PK-like) 63 382 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g00860 Pste-Chr2 9253899 9258370 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g00860 7 411 MAP Kinase Kinase Kinase AT3G22750 60.147 0.0 514
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Pste2g00860 PK_Tyr_Ser-Thr 8.2e-58 CL0016