Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g00855 GCCGCCCAGTACGACCGTGGTACACACTTCGGCCAGGATCATTTAATTGGCGTTAATTTCATTACAAAGAGGAGCATCTCTCTTCTTTCACTATACCAAGTACAAACCAATCCGTTTCTATTTTCTCCTAAACTCAAATCCCTAGTACAAAAGGGGAAAATAATTAAAAAGAAACACAGTGGAGTTCAGTTCGGATAGTAAGTTTCATTGAATAAACAAACAAAGCATTAAAGCAACCATGACGGAACCTCAGAATCCTTCACCATTGACACATTCTTCACCACAACCCCAGCCACTGCCACCTCCCAAAAAGAAGCGAAGCCTCCCTGGAATGCCAGATCCAGATGCTGAAGTGATTGCTTTGTCACCGAAGACACTGTTGGCGACAAACCGTTTCGTGTGCGAGATCTGCAACAAAGGGTTCCAACGCGACCAAAACCTGCAGCTTCACCGACGTGGCCACAACTTGCCGTGGAAGCTGCGGCAGCGAGGGAGCAAGGAGCCGCGCAAGAAAGCGTACGTGTGTCCCGAACCTTCCTGCGTCCACCACAACCCCGCCAGGGCGCTTGGCGATCTCACCGGCATAAAAAAGCACTTCTGCAGAAAACACGGCGAGAAGAAGTGGAAATGCGAACGCTGCTCTAAGAAATATGCCGTACACTCCGATTGGAAAGCGCATATGAAAACTTGCGGCACCAGAGAGTACCGATGCGACTGCGGCACCTTGTTCTCTAGGAGGGATAGTTTCATCACGCATAGAGCATTTTGCGATGTCTTAGCACAAGAGAGTGCGAGGGCCCAGGTCGAATCCCAAGTCCAGGTCCAAGGTGTTACCAATGAAAACGTTGTTGTGGCTTCTTCGCCGCCTGCACCTCCTCTTACACCCTCTGCGTCTGTGGTGTCTCCAACTTTGTCCATCGAGAGCTCAGAAATTCCGGAAAACCCAACGAAGAAGTCACGGACGTCTCCAAACGCAGGGTGTTTGGGGACAAGCAACAGCATCCCTTGCACCACTGTTTTTGCAAGTGTGTTGGCATCGTCCTCAACAGCAACTCCTTTAGAATCACCATCGACATCCTCATTCTCCAAGCTATTGTCAAACCTGGCTGGGTCGGATAACGGCAATGCCATATCTAATTTGAGAGAACCAACATCCCTATCCCTTTCCACACCTCTGTTTCTCTCCAACAATGACCCTCATTACACCGCATCACCCCAACCTGCATTGTCTGCCACTGCACTTCTCCAAAAGGCAGCTCAAATGGGTTCATCCAATGCCTCCCTTCTTCGTGGCTTAGGCTTGGCAACAACATCTTCGTCGTCCTTCTGGAAAGACGAGGGTGCTATCATCAATGTCCCAACAACACTACAATGGAATGGCCAAGTAAAGCAAGAGAGTCATCCGGTGGTGGATAACCTTGGGCTTGGGCTTCTGTGTGGGAGTGGAAGTGTGACAGATGTGATGATGGGCCAGCCCATGACCCGTGATCTTCTGGGTCTGAGCATCGGTGTCGACGGAGCAAGCAGGGGTGGTCTCTCTGCTCTGCTCACCTCTTTTGGTGGGAACTTCGATACATCCGGAGACGGAGGAGATCACCGGTACAAAACTGGCAACTATTAATTTGTCCTCTCTTTGGCCACACCAGGAATTTTTGTGACAGGTGAATCAGCCAATTCTGTTGTTATTCAGGAAATAATAGGATAAAGTTACATATATAATGTATTAGAATCTACCTTTTGAATATTTATATGTATAAATGTCTTCTCACTTTTTCTTTTCTGTAATAAGTGTGCTTATGCTGTCATCAAAATGTGGATATGG 1822 0.4813 MTEPQNPSPLTHSSPQPQPLPPPKKKRSLPGMPDPDAEVIALSPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRGSKEPRKKAYVCPEPSCVHHNPARALGDLTGIKKHFCRKHGEKKWKCERCSKKYAVHSDWKAHMKTCGTREYRCDCGTLFSRRDSFITHRAFCDVLAQESARAQVESQVQVQGVTNENVVVASSPPAPPLTPSASVVSPTLSIESSEIPENPTKKSRTSPNAGCLGTSNSIPCTTVFASVLASSSTATPLESPSTSSFSKLLSNLAGSDNGNAISNLREPTSLSLSTPLFLSNNDPHYTASPQPALSATALLQKAAQMGSSNASLLRGLGLATTSSSSFWKDEGAIINVPTTLQWNGQVKQESHPVVDNLGLGLLCGSGSVTDVMMGQPMTRDLLGLSIGVDGASRGGLSALLTSFGGNFDTSGDGGDHRYKTGNY 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g00855 460 MobiDBLite consensus disorder prediction 1 37 - -
Pste2g00855 460 FunFam protein indeterminate-domain 5, chloroplastic-like 107 186 - -
Pste2g00855 460 SMART c2h2final6 94 124 IPR013087 -
Pste2g00855 460 SMART c2h2final6 53 75 IPR013087 -
Pste2g00855 460 SMART c2h2final6 129 149 IPR013087 -
Pste2g00855 460 FunFam protein indeterminate-domain 12-like 32 100 - -
Pste2g00855 460 ProSitePatterns Zinc finger C2H2 type domain signature. 55 75 IPR013087 -
Pste2g00855 460 Gene3D Classic Zinc Finger 33 100 - -
Pste2g00855 460 ProSiteProfiles Zinc finger C2H2 type domain profile. 53 75 IPR013087 -
Pste2g00855 460 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 10 426 IPR031140 -
Pste2g00855 460 MobiDBLite consensus disorder prediction 228 247 - -
Pste2g00855 460 MobiDBLite consensus disorder prediction 10 28 - -
Pste2g00855 460 Gene3D Classic Zinc Finger 107 187 - -
Pste2g00855 460 Pfam Zinc-finger of C2H2 type 53 75 - -
Pste2g00855 460 SUPERFAMILY beta-beta-alpha zinc fingers 52 150 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g00855 Pste-Chr2 9159443 9162715 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g00855 17 437 IDZ Gene Family AT3G50700 53.953 5.06e-130 382
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Pste2g00855 zf-met 0.0033 CL0361
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g00855 2 9159443 9162715 Pste2g00855 2 9159443 9162715 ECH